RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 SPDEFO95238 335 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 RAC2P15153 192 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 ENGP17813 658 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 PSPHP78330 225 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 ZNF283Q8N7M2 679 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 NKD2Q969F2 451 aaPredicted RBP12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 RBP7Q96R05 134 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 OR4K3Q96R72 315 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 C11orf84Q9BUA3 381 aaPredicted RBP12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 SLC2A4RGQ9NR83 387 aa12.78□□□□□ -0.36
SRGAP3-201ENST00000360413 NPPAP01160 153 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 CSNK2A2P19784 350 aaPredicted RBP12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 S1PR1P21453 382 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 DUSP3P51452 185 aaPredicted RBP12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 ARL6IP1Q15041 203 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 AAK1Q2M2I8 961 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 GRHL3Q8TE85 626 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 POTEKPQ9BYX7 375 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 AKTIPQ9H8T0 292 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 NENFQ9UMX5 172 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 CA5BQ9Y2D0 317 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 WDR45Q9Y484 360 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 RIMS1Q86UR5 1692 aaKnown RBP12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 GMDSO60547 372 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 DNAJB5O75953 348 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 SLAIN1Q8ND83 568 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 SMPDL3BQ92485 455 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 FUNDC2Q9BWH2 189 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 ACTR10Q9NZ32 417 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 FNIP2Q9P278 1114 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 IRS2Q9Y4H2 1338 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 D6RAR5 112 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 TRAPPC6AO75865 159 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 CHRM1P11229 460 aaPredicted RBP12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 HOXA9P31269 272 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 GRM5P41594 1212 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 CLRN1P58418 232 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 TDGQ13569 410 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 GPR33Q49SQ1 333 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 PLPP4Q5VZY2 271 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 PPP2R2DQ66LE6 453 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 SLC36A4Q6YBV0 504 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 ZNF584Q8IVC4 421 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 MMAAQ8IVH4 418 aaKnown RBP12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 OR6K2Q8NGY2 324 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 CPT1CQ8TCG5 803 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 ARL5BQ96KC2 179 aa12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 ZNF317Q96PQ6 595 aaPredicted RBP12.77□□□□□ -0.36
SRGAP3-201ENST00000360413 PROM1O43490 865 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 MAFO75444 373 aaPredicted RBP12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 RBBP9O75884 186 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 RGS9O75916 674 aaPredicted RBP12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 CHRNA1P02708 482 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 HTR1AP08908 422 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 CHRNB1P11230 501 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 PTPN2P17706 415 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 CNTN2Q02246 1040 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 SLC36A3Q495N2 470 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 LIX1LQ8IVB5 337 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 THEM6Q8WUY1 208 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 FKBP10Q96AY3 582 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 MKRN2Q9H000 416 aaKnown RBP12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 MEAF6Q9HAF1 191 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 YDJCA8MPS7 323 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 E9PI62 339 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 ACTC1P68032 377 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 ACTA1P68133 377 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 RELAQ04206 551 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 SMIM15Q7Z3B0 74 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 NOXA1Q86UR1 476 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 TSTD1Q8NFU3 115 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 OR52E4Q8NGH9 312 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 TRAPPC12Q8WVT3 735 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 GRHPRQ9UBQ7 328 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 CLDN5O00501 218 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 SOX14O95416 240 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 EOMESO95936 686 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 PFKLP17858 780 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 CERS1P27544 350 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 RFX5P48382 616 aaPredicted RBP12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 BCL2L15Q5TBC7 163 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 PRAMEF13Q5VWM6 474 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 CARM1Q86X55 608 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 SIDT2Q8NBJ9 832 aaKnown RBP12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 PTERQ96BW5 349 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 LURAP1Q96LR2 239 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 METTL7AQ9H8H3 244 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 TMEM100Q9NV29 134 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 TMEM14AQ9Y6G1 99 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 AP1M2Q9Y6Q5 423 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 SNRNP200O75643 2136 aaKnown RBP12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 H0YAE9 185 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 DFNA5O60443 496 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 PBX1P40424 430 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 WDR4P57081 412 aaKnown RBP12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 SLC26A5P58743 744 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 ST3GAL3Q11203 375 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 ESCO2Q56NI9 601 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 EOGTQ5NDL2 527 aa12.77□□□□□ -0.37
SRGAP3-201ENST00000360413 GPR157Q5UAW9 335 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms