RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 ZCCHC7Q8N3Z6 543 aaKnown RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 DTWD1Q8N5C7 304 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 ACOT4Q8N9L9 421 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 OR9A4Q8NGU2 314 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 CEP70Q8NHQ1 597 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 GBP5Q96PP8 586 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 OR52B2Q96RD2 323 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 SERINC2Q96SA4 455 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 NPLQ9BXD5 320 aaPredicted RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 SLC7A5P2Q9GIP4 190 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 NSRP1Q9H0G5 558 aaKnown RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 TXLNGQ9NUQ3 528 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 TMED5Q9Y3A6 229 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 NAALAD2Q9Y3Q0 740 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 TMEM184BQ9Y519 407 aaPredicted RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 PCDHGA7Q9Y5G6 932 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 PKD1L2Q7Z442 2459 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 A0A0G2JND7 137 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 CDRT15L2A8MXV6 281 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 SGK494L7N484 410 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 DNAJB6O75190 326 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 DXOO77932 396 aaKnown RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 ACPPP15309 386 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 ITGAXP20702 1163 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 TIA1P31483 386 aaKnown RBP eCLIP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 SSR2P43308 183 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 AVPR1BP47901 424 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 SKP1P63208 163 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 RUNX2Q13950 521 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 COL9A2Q14055 689 aaPredicted RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 LSM12Q3MHD2 195 aaKnown RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 GALNTL6Q49A17 601 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 MRM1Q6IN84 353 aaKnown RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 NOXRED1Q6NXP6 359 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 ACAD11Q709F0 780 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 NUDT13Q86X67 352 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 CLIP3Q96DZ5 547 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 CCT8L2Q96SF2 557 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 ELAC2Q9BQ52 826 aaKnown RBP11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 MFRPQ9BY79 579 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 ULBP3Q9BZM4 244 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 TCF7L2Q9NQB0 619 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 NDOR1Q9UHB4 597 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 MCM8Q9UJA3 840 aa11.75□□□□□ -0.53
NIF3L1-201ENST00000359683 CACNA1GO43497 2377 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 MEN1O00255 615 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 B3GALT2O43825 422 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 TMPRSS11DO60235 418 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 SNX3O60493 162 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 STK17BO94768 372 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 MYO1DO94832 1006 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 DLGAP3O95886 979 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 CERS1P27544 350 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 RBMS1P29558 406 aaKnown RBP11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 OR1D4P47884 311 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 ARFIP2P53365 341 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 ERVK-8P63133 956 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 RPL38P63173 70 aaKnown RBP11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 ABHD18Q0P651 414 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 MAD2L1Q13257 205 aaPredicted RBP11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 SLAMF1Q13291 335 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 SLC9A5Q14940 896 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 CCNYL2Q5T2Q4 361 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 C1orf189Q5VU69 101 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 IL23RQ5VWK5 629 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 ZNF517Q6ZMY9 492 aaPredicted RBP11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 SPATA21Q7Z572 469 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 SPATA19Q7Z5L4 167 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 PIGWQ7Z7B1 504 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 PARP9Q8IXQ6 854 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 DSELQ8IZU8 1212 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 FNDC5Q8NAU1 212 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 MMABQ96EY8 250 aaPredicted RBP11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 TMEM120AQ9BXJ8 343 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 FAM107BQ9H098 131 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 COPS7BQ9H9Q2 264 aaPredicted RBP11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 ZNF304Q9HCX3 659 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 LYRM4Q9HD34 91 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 ASCL3Q9NQ33 180 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 SLC22A11Q9NSA0 550 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 ASIC5Q9NY37 505 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 KCMF1Q9P0J7 381 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 FOXJ2Q9P0K8 574 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 DLGAP4Q9Y2H0 992 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 ASB4Q9Y574 426 aa11.74□□□□□ -0.53
NIF3L1-201ENST00000359683 FER1L5A0AVI2 2057 aa11.73□□□□□ -0.53
NIF3L1-201ENST00000359683 ASPMQ8IZT6 3477 aa11.73□□□□□ -0.53
NIF3L1-201ENST00000359683 TRABD2BA6NFA1 517 aa11.73□□□□□ -0.53
NIF3L1-201ENST00000359683 ZNF860A6NHJ4 632 aa11.73□□□□□ -0.53
NIF3L1-201ENST00000359683 CHST10O43529 356 aa11.73□□□□□ -0.53
NIF3L1-201ENST00000359683 PCDH7O60245 1069 aa11.73□□□□□ -0.53
NIF3L1-201ENST00000359683 RDH16O75452 317 aa11.73□□□□□ -0.53
NIF3L1-201ENST00000359683 GBAP04062 536 aa11.73□□□□□ -0.53
NIF3L1-201ENST00000359683 KLK3P07288 261 aaPredicted RBP11.73□□□□□ -0.53
NIF3L1-201ENST00000359683 ANXA4P09525 319 aaPredicted RBP11.73□□□□□ -0.53
NIF3L1-201ENST00000359683 SLC5A2P31639 672 aa11.73□□□□□ -0.53
NIF3L1-201ENST00000359683 TRA2BP62995 288 aaKnown RBP11.73□□□□□ -0.53
NIF3L1-201ENST00000359683 DCDP81605 110 aaKnown RBP11.73□□□□□ -0.53
NIF3L1-201ENST00000359683 SF3A3Q12874 501 aaKnown RBP eCLIP11.73□□□□□ -0.53
NIF3L1-201ENST00000359683 DSG2Q14126 1118 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms