RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 BEX2Q9BXY8 128 aa13.21□□□□□ -0.3
VCP-201ENST00000358901 BEX1Q9HBH7 125 aa13.21□□□□□ -0.3
VCP-201ENST00000358901 PDCD5O14737 125 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 PRODHO43272 600 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 BPIP17213 487 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 AFF1P51825 1210 aaKnown RBP13.2□□□□□ -0.3
VCP-201ENST00000358901 AP2S1P53680 142 aaPredicted RBP13.2□□□□□ -0.3
VCP-201ENST00000358901 VLDLRP98155 873 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 SPHARQ15513 63 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 CTC1Q2NKJ3 1217 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 THOC7Q6I9Y2 204 aaKnown RBP13.2□□□□□ -0.3
VCP-201ENST00000358901 DPY19L2P1Q6NXN4 242 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 FAM43BQ6ZT52 329 aaPredicted RBP13.2□□□□□ -0.3
VCP-201ENST00000358901 LARP4Q71RC2 724 aaKnown RBP eCLIP13.2□□□□□ -0.32e-6■□□□□ 9.7
VCP-201ENST00000358901 CHCHD4Q8N4Q1 142 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 ABHD11Q8NFV4 315 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 OVCA2Q8WZ82 227 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 MAL2Q969L2 176 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 IL17FQ96PD4 163 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 PIP5K1AQ99755 562 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 VAPAQ9P0L0 249 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 PCDHB14Q9Y5E9 798 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 GMEB1Q9Y692 573 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 IRS2Q9Y4H2 1338 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 A0A1B0GVG6 124 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 RTCAO00442 366 aaKnown RBP13.2□□□□□ -0.3
VCP-201ENST00000358901 TSPAN4O14817 238 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 PROM1O43490 865 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 HK1P19367 917 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 MAZP56270 477 aaKnown RBP13.2□□□□□ -0.3
VCP-201ENST00000358901 LRP8Q14114 963 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 TRAM2Q15035 370 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 PON3Q15166 354 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 CCBE1Q6UXH8 406 aaPredicted RBP13.2□□□□□ -0.3
VCP-201ENST00000358901 ARHGAP12Q8IWW6 846 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 SLC30A3Q99726 388 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 XKR8Q9H6D3 395 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 A0A1W2PQ45 241 aaPredicted RBP13.2□□□□□ -0.3
VCP-201ENST00000358901 A0A1W2PQY0 241 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 GSTT2BP0CG30 244 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 OR12D1P0DN82 309 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 LAMP1P11279 417 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 PEPDP12955 493 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 EDNRAP25101 427 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 ARPC4P59998 168 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 GK3PQ14409 553 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 TAZQ16635 292 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 PAMR1Q6UXH9 720 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 SLC25A36Q96CQ1 311 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 ZNF597Q96LX8 424 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 C11orf84Q9BUA3 381 aaPredicted RBP13.2□□□□□ -0.3
VCP-201ENST00000358901 TAPBPLQ9BX59 468 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 OR51I1Q9H343 314 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 CMAHPQ9Y471 501 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 PCDHGB1Q9Y5G3 927 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 EDDM13A0A1B0GTR0 161 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 KIAA0513O60268 411 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 AOC2O75106 756 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 FCER2P06734 321 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 NDUFS1P28331 727 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 ID2Q02363 134 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 DSG2Q14126 1118 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 UGT8Q16880 541 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 ZNF534Q76KX8 674 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 LHFPL3Q86UP9 236 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 C3orf58Q8NDZ4 430 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 CD200R1Q8TD46 325 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 NETO1Q8TDF5 533 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 TRIB2Q92519 343 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 TFAP2CQ92754 450 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 FUZQ9BT04 418 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 PLEKHA1Q9HB21 404 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 FBXL12Q9NXK8 326 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 CLCA3PQ9Y6N3 262 aa13.2□□□□□ -0.3
VCP-201ENST00000358901 KLHL33A6NCF5 533 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 ITGA10O75578 1167 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 PAK4O96013 591 aaPredicted RBP13.19□□□□□ -0.3
VCP-201ENST00000358901 UQCRC2P22695 453 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 IL12BP29460 328 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 INHBCP55103 352 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 PUM1Q14671 1186 aaKnown RBP eCLIP13.19□□□□□ -0.36e-6■■■■□ 21
VCP-201ENST00000358901 TBRG1Q3YBR2 411 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 SLC27A4Q6P1M0 643 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 ZCCHC12Q6PEW1 402 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 TSPYL5Q86VY4 417 aaPredicted RBP13.19□□□□□ -0.3
VCP-201ENST00000358901 APCDD1Q8J025 514 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 CAMKVQ8NCB2 501 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 OR8J1Q8NGP2 316 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 HUS1BQ8NHY5 278 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 METTL21AQ8WXB1 218 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 SIPA1Q96FS4 1042 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 TTTY10Q9BZA0 68 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 IRF2BPLQ9H1B7 796 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 IL17CQ9P0M4 197 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 RIMS3Q9UJD0 308 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 PCP4L1A6NKN8 68 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 H3BSH0 61 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 PSMD9O00233 223 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 FGF18O76093 207 aa13.19□□□□□ -0.3
VCP-201ENST00000358901 TNFRSF1BP20333 461 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms