RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 RHCEP18577 417 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 HCAR3P49019 387 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 RGS6P49758 472 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 MTFR2Q6P444 385 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 GOLGA7Q7Z5G4 137 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 PLD6Q8N2A8 252 aaKnown RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 PSMG2Q969U7 264 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 MMP28Q9H239 520 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 NWD2Q9ULI1 1742 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 TRAPPC13A5PLN9 417 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 OR2AG2A6NM03 316 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 FAAHO00519 579 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF823P16415 610 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 GM2AP17900 193 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 TLE2Q04725 743 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 EN1Q05925 392 aaPredicted RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 AKR1C8PQ5T2L2 129 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 RPL13AP3Q6NVV1 102 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 ENPP6Q6UWR7 440 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 HSDL2Q6YN16 418 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 METTL4Q8N3J2 472 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 CHCHD4Q8N4Q1 142 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 OR5AK3PQ8NH89 298 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 SUSD6Q92537 303 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 CNOT9Q92600 299 aaKnown RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 PDZD7Q9H5P4 517 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 POPDC3Q9HBV1 291 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 KIAA1522Q9P206 1035 aaPredicted RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 FKBPLQ9UIM3 349 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 SLC35F4A4IF30 521 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 CCR8P51685 355 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 RNF130Q86XS8 419 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 RHEBL1Q8TAI7 183 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 MAF1Q9H063 256 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 CD300AQ9UGN4 299 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 ESPL1Q14674 2120 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 VNN1O95497 513 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 SF3A2Q15428 464 aaKnown RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 CNIH2Q6PI25 160 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 C3P1Q6ZMU1 363 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF584Q8IVC4 421 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 CHFRQ96EP1 664 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 LRCH3Q96II8 777 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 NIFKQ9BYG3 293 aaKnown RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 ABCG4Q9H172 646 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 MKKSQ9NPJ1 570 aaPredicted RBP8.47□□□□□ -1.05
COL6A6-201ENST00000358511 ASF1BQ9NVP2 202 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 PCDHGA7Q9Y5G6 932 aa8.47□□□□□ -1.05
COL6A6-201ENST00000358511 MAST2Q6P0Q8 1798 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 MATN4O95460 622 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 HTR1AP08908 422 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 SMIM10L2AP0DMW4 78 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 SMIM10L2BP0DMW5 78 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 ACTBP60709 375 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 ACTG1P63261 375 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF616Q08AN1 781 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 SIRPB2Q5JXA9 342 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 MPP7Q5T2T1 576 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 VTCN1Q7Z7D3 282 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 PAPD5Q8NDF8 572 aaKnown RBP8.46□□□□□ -1.05
COL6A6-201ENST00000358511 OR51J1Q9H342 316 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 ZNF670-ZNF695F2Z2N8 137 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 H3BUI4 141 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 PRAF2O60831 178 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 SPDEFO95238 335 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 PTPRAP18433 802 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 RPS5P46782 204 aaKnown RBP8.46□□□□□ -1.05
COL6A6-201ENST00000358511 LEPRP48357 1165 aaKnown RBP8.46□□□□□ -1.05
COL6A6-201ENST00000358511 C15orf52Q6ZUT6 534 aaKnown RBP8.46□□□□□ -1.05
COL6A6-201ENST00000358511 NUDT13Q86X67 352 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 GTPBP8Q8N3Z3 284 aaPredicted RBP8.46□□□□□ -1.05
COL6A6-201ENST00000358511 PEX13Q92968 403 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 ELMOD3Q96FG2 381 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 NECAB3Q96P71 396 aaPredicted RBP8.46□□□□□ -1.05
COL6A6-201ENST00000358511 SYT4Q9H2B2 425 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 SOHLH2Q9NX45 425 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 RNF181Q9P0P0 153 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 NUFIP1Q9UHK0 495 aaKnown RBP8.46□□□□□ -1.05
COL6A6-201ENST00000358511 C1QTNF3-AMACRE9PGA6 284 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 OR1F1O43749 312 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 SC5DO75845 299 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 RBBP9O75884 186 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 STSP08842 583 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 PKLRP30613 574 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 STC1P52823 247 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 EEF1DP3Q658K8 133 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 WDR53Q7Z5U6 358 aaPredicted RBP8.46□□□□□ -1.05
COL6A6-201ENST00000358511 POGLUT1Q8NBL1 392 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 OR4F6Q8NGB9 312 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 OR8J1Q8NGP2 316 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 MRIQ9BWK5 157 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 IMP3Q9NV31 184 aaKnown RBP8.46□□□□□ -1.05
COL6A6-201ENST00000358511 FAM170BA6NMN3 283 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 TLL1O43897 1013 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 SSX4O60224 188 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 IFNA10P01566 189 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 IFNA4P05014 189 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 SLC35G6P0C7Q6 338 aa8.46□□□□□ -1.05
COL6A6-201ENST00000358511 TFPIP10646 304 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms