RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 PCDHGA4Q9Y5G9 962 aa8.75□□□□□ -1.01
UPF2-202ENST00000357604 A8MVJ9 347 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 H0YIV9 168 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 PRKAR1AP10644 381 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 MAPKAPK3Q16644 382 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 PDCD4Q53EL6 469 aaKnown RBP8.74□□□□□ -1.01
UPF2-202ENST00000357604 AGKQ53H12 422 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 UNC50Q53HI1 259 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 ARL13AQ5H913 290 aaPredicted RBP8.74□□□□□ -1.01
UPF2-202ENST00000357604 JMJD6Q6NYC1 403 aaPredicted RBP8.74□□□□□ -1.01
UPF2-202ENST00000357604 ASCL5Q7RTU5 278 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 CLNKQ7Z7G1 428 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 ATCAYQ86WG3 371 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 COX18Q8N8Q8 333 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 TMEM178AQ8NBL3 297 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 OR7G1Q8NGA0 311 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 UBXN10Q96LJ8 280 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 CDK15Q96Q40 435 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 REEP4Q9H6H4 257 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 SOX17Q9H6I2 414 aaPredicted RBP8.74□□□□□ -1.01
UPF2-202ENST00000357604 CUEDC1Q9NWM3 386 aaPredicted RBP8.74□□□□□ -1.01
UPF2-202ENST00000357604 HPF1Q9NWY4 346 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 KCNE1BA0A087WTH5 132 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 KLF11O14901 512 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 SERPINB7O75635 380 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 GGT5P36269 586 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 PRKAG1P54619 331 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 BTBD16Q32M84 506 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.74□□□□□ -1.01
UPF2-202ENST00000357604 IL23RQ5VWK5 629 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 XKR5Q6UX68 686 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 CDHR3Q6ZTQ4 885 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 MCEMP1Q8IX19 187 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 MDM1Q8TC05 714 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 GFM2Q969S9 779 aaKnown RBP8.74□□□□□ -1.01
UPF2-202ENST00000357604 OR2A14Q96R47 310 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 OR52E6Q96RD3 313 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 F2RL3Q96RI0 385 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 DUSP26Q9BV47 211 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 BHLHE41Q9C0J9 482 aaPredicted RBP8.74□□□□□ -1.01
UPF2-202ENST00000357604 ADPRHL2Q9NX46 363 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 KLHL20Q9Y2M5 609 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 E9PBE3 544 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 ZFAND5O76080 213 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 SIX3O95343 332 aaPredicted RBP8.74□□□□□ -1.01
UPF2-202ENST00000357604 NR2F1P10589 423 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 CRATP43155 626 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 GUCY1A3Q02108 690 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 EMX2Q04743 252 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 LARS2Q15031 903 aaKnown RBP8.74□□□□□ -1.01
UPF2-202ENST00000357604 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.74□□□□□ -1.013e-11■■■□□ 18.3
UPF2-202ENST00000357604 TMEM151BQ8IW70 566 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 ENDOVQ8N8Q3 282 aaKnown RBP8.74□□□□□ -1.01
UPF2-202ENST00000357604 BHLHE22Q8NFJ8 381 aaPredicted RBP8.74□□□□□ -1.01
UPF2-202ENST00000357604 AGAP11Q8TF27 550 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 ESAMQ96AP7 390 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 TLCD1Q96CP7 247 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 PANX1Q96RD7 426 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 HOXD1Q9GZZ0 328 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 SPRTNQ9H040 489 aaPredicted RBP8.74□□□□□ -1.01
UPF2-202ENST00000357604 VCX3BQ9H321 246 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 LDAHQ9H6V9 325 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 STARD5Q9NSY2 213 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 ZIM2Q9NZV7 527 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 BTBD3Q9Y2F9 522 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 PCDHGA8Q9Y5G5 932 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 RFXANKO14593 260 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 CHST10O43529 356 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 MYF5P13349 255 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 IL1RNP18510 177 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 POLR2JP52435 117 aaKnown RBP8.74□□□□□ -1.01
UPF2-202ENST00000357604 NME5P56597 212 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 TBC1D25Q3MII6 688 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 AGAP7PQ5VUJ5 663 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 ERICH5Q6P6B1 374 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 MSANTD1Q6ZTZ1 278 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 GLRX5Q86SX6 157 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 IQCKQ8N0W5 287 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 ANKRD49Q8WVL7 239 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 OR5P2Q8WZ92 322 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 AGAP4Q96P64 663 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 UTP23Q9BRU9 249 aaKnown RBP8.74□□□□□ -1.01
UPF2-202ENST00000357604 GEMIN8Q9NWZ8 242 aaKnown RBP8.74□□□□□ -1.01
UPF2-202ENST00000357604 KLRF1Q9NZS2 232 aa8.74□□□□□ -1.01
UPF2-202ENST00000357604 A0A1W2PRB8 838 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 B4GAT1O43505 415 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 STATHP02808 62 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 BCL6P41182 706 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 ATP4BP51164 291 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 XKP51811 444 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 CXADRP78310 365 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 TNFRSF17Q02223 184 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 DEFB109BQ30KR1 87 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 TCHHL1Q5QJ38 904 aaPredicted RBP8.73□□□□□ -1.01
UPF2-202ENST00000357604 SLCO4C1Q6ZQN7 724 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 ZNF547Q8IVP9 402 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 RASSF5Q8WWW0 418 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 THOC1Q96FV9 657 aaKnown RBP8.73□□□□□ -1.01
UPF2-202ENST00000357604 C1orf50Q9BV19 199 aa8.73□□□□□ -1.01
UPF2-202ENST00000357604 PTGES2Q9H7Z7 377 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms