RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 MYLK3Q32MK0 819 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 RGMBQ6NW40 437 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 PRSS55Q6UWB4 352 aaPredicted RBP11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 MBOAT1Q6ZNC8 495 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 ASRGL1Q7L266 308 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 OR4C15Q8NGM1 316 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 CD180Q99467 661 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 MTG2Q9H4K7 406 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 RGCCQ9H4X1 137 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 hCG_1807616A0A1W2PRN6 198 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 NPIPA2E9PIF3 369 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 NPIPA3F8WFD2 350 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 HRGP04196 525 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 CD48P09326 243 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 L1CAMP32004 1257 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 NDST2P52849 883 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 RAB4BP61018 213 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 NOGQ13253 232 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 DSC3Q14574 896 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 VARS2Q5ST30 1063 aaKnown RBP11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 C6orf141Q5SZD1 244 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 ZNF334Q9HCZ1 680 aaPredicted RBP11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 SCGB2A1O75556 95 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 OPN1SWP03999 348 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 C8orf89P0DMQ9 161 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 FOXK1P85037 733 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 COL28A1Q2UY09 1125 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 SLC22A17Q8WUG5 538 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 SH3YL1Q96HL8 342 aaPredicted RBP11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 NIFKQ9BYG3 293 aaKnown RBP11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 ATG5Q9H1Y0 275 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 REV1Q9UBZ9 1251 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 BAZ2AQ9UIF9 1905 aaKnown RBP11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 A0A1B0GV50 99 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 C11orf98E9PRG8 122 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 SHOXO15266 292 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 LRRTM2O43300 516 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 CDRT1O95170 752 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 GKN3PP0CG01 181 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 DPY19L4Q7Z388 723 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 DCP2Q8IU60 420 aaKnown RBP11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 OR8J3Q8NGG0 315 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 POC1BQ8TC44 478 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 ST14Q9Y5Y6 855 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 SPATA31D1Q6ZQQ2 1576 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 SOX1O00570 391 aaPredicted RBP11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 WNT9AO14904 365 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 SULT1B1O43704 296 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 PLATP00750 562 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 FKBP1AP62942 108 aaKnown RBP11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 GNMTQ14749 295 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 TSTD2Q5T7W7 516 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 CARM1Q86X55 608 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 OR4E2Q8NGC2 313 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 ZCCHC3Q9NUD5 404 aaKnown RBP11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 NCDNQ9UBB6 729 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 NUFIP1Q9UHK0 495 aaKnown RBP11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 TMPRSS11EQ9UL52 423 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 ICKQ9UPZ9 632 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 PCDHB14Q9Y5E9 798 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 LDB2O43679 373 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 CREBL2O60519 120 aaPredicted RBP11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 GDI1P31150 447 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 PRMT2P55345 433 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 DACT2Q5SW24 774 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 PRAMEF14Q5SWL7 426 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 PRAMEF13Q5VWM6 474 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 TCEANCQ8N8B7 351 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 PBDC1Q9BVG4 233 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 MKRN2Q9H000 416 aaKnown RBP11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 BCAS3Q9H6U6 928 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 CLDND1Q9NY35 253 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 ACSL5Q9ULC5 683 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 TNS2Q63HR2 1409 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 SPEF2Q9C093 1822 aa11.12□□□□□ -0.63
SPTBN1-202ENST00000356805 LATS1O95835 1130 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 C8AP07357 584 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 ADH6P28332 368 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 CEACAM20Q6UY09 585 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 TMPPEQ6ZT21 453 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 C12orf40Q86WS4 652 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 Q8N402 240 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 SLAIN1Q8ND83 568 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 FANK1Q8TC84 345 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 ZDHHC7Q9NXF8 308 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 CACNG4Q9UBN1 327 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 CCDC88AQ3V6T2 1871 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 CILPO75339 1184 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 GBAP04062 536 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 MRPL3P09001 348 aaKnown RBP11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 FASLGP48023 281 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 CLCNKAP51800 687 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 SPIN4Q56A73 249 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 CAMKVQ8NCB2 501 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 FCAMRQ8WWV6 532 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 SSX3Q99909 188 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 MAGEH1Q9H213 219 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 NANSQ9NR45 359 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 ERCC6L2Q5T890 1561 aa11.11□□□□□ -0.63
SPTBN1-202ENST00000356805 MEIS2O14770 477 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms