RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 NKX6-2Q9C056 277 aaPredicted RBP15.12■□□□□ 0.01
RTN3-205ENST00000356000 EVA1AQ9H8M9 152 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 TREX1Q9NSU2 369 aa15.12■□□□□ 0.01
RTN3-205ENST00000356000 LSM2Q9Y333 95 aaKnown RBP15.12■□□□□ 0.01
RTN3-205ENST00000356000 WRBO00258 174 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 RASGRP1O95267 797 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 FABP3P05413 133 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 UROSP10746 265 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 SFTPCP11686 197 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 HSPA7P48741 367 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 VSX2P58304 361 aaPredicted RBP15.11■□□□□ 0.01
RTN3-205ENST00000356000 LRRC32Q14392 662 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 GPR176Q14439 515 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 ZNF638Q14966 1978 aaKnown RBP15.11■□□□□ 0.01
RTN3-205ENST00000356000 MICBQ29980 383 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 PLAG1Q6DJT9 500 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 SLC25A25Q6KCM7 469 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 SLC16A13Q7RTY0 426 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 FTMTQ8N4E7 242 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 CAMKVQ8NCB2 501 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 PPHLN1Q8NEY8 458 aaKnown RBP15.11■□□□□ 0.01
RTN3-205ENST00000356000 AP3S1Q92572 193 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 ELP4Q96EB1 424 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 PAPOLGQ9BWT3 736 aaKnown RBP15.11■□□□□ 0.01
RTN3-205ENST00000356000 SEMA4CQ9C0C4 833 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 REEP1Q9H902 201 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 OTOFQ9HC10 1997 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 NDUFB11Q9NX14 153 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 PPP1R14DQ9NXH3 145 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 KLF15Q9UIH9 416 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 ING1Q9UK53 422 aaPredicted RBP15.11■□□□□ 0.01
RTN3-205ENST00000356000 TRBV23-1A0A0A0MS06 115 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 G3V3Q6 166 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 E2F3O00716 465 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 PER2O15055 1255 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 SEMG1P04279 462 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 G6PDP11413 515 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 CD1DP15813 335 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 RPS7P62081 194 aaKnown RBP15.11■□□□□ 0.01
RTN3-205ENST00000356000 ZNF57Q68EA5 555 aaPredicted RBP15.11■□□□□ 0.01
RTN3-205ENST00000356000 TRMT11Q7Z4G4 463 aaKnown RBP15.11■□□□□ 0.01
RTN3-205ENST00000356000 PHACTR4Q8IZ21 702 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 IPMKQ8NFU5 416 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 OR52K2Q8NGK3 314 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 OTUB1Q96FW1 271 aaPredicted RBP15.11■□□□□ 0.01
RTN3-205ENST00000356000 ZNF285Q96NJ3 590 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 SEMA4BQ9NPR2 832 aaPredicted RBP15.11■□□□□ 0.01
RTN3-205ENST00000356000 GPR160Q9UJ42 338 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 PCDHA10Q9Y5I2 948 aa15.11■□□□□ 0.01
RTN3-205ENST00000356000 DCLK1O15075 740 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 CASC3O15234 703 aaKnown RBP15.1■□□□□ 0.01
RTN3-205ENST00000356000 PSMD3O43242 534 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 ZNF682O95780 498 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 RAB3BP20337 219 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 IDH2P48735 452 aaKnown RBP15.1■□□□□ 0.01
RTN3-205ENST00000356000 VLDLRP98155 873 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 KLHDC8BQ8IXV7 354 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 PIAS4Q8N2W9 510 aaPredicted RBP15.1■□□□□ 0.01
RTN3-205ENST00000356000 PKMYT1Q99640 499 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 MRPL45Q9BRJ2 306 aaKnown RBP15.1■□□□□ 0.01
RTN3-205ENST00000356000 B3GNT5Q9BYG0 378 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 NIT2Q9NQR4 276 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 POLE3Q9NRF9 147 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 TXNL4BQ9NX01 149 aaKnown RBP15.1■□□□□ 0.01
RTN3-205ENST00000356000 MPP6Q9NZW5 540 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 MALT1Q9UDY8 824 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 EXO1Q9UQ84 846 aaKnown RBP15.1■□□□□ 0.01
RTN3-205ENST00000356000 ENTPD4Q9Y227 616 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 RGS11O94810 467 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 SULT1A3P0DMM9 295 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 SULT1A4P0DMN0 295 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 ITPKAP23677 461 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 CALCRP30988 508 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 RFC3P40938 356 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 ARFIP1P53367 373 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 CDKN2DP55273 166 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 IL18Q14116 193 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 ARHGAP15Q53QZ3 475 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 ZNF730Q6ZMV8 503 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 TMEM163Q8TC26 289 aa15.1■□□□□ 0.01
RTN3-205ENST00000356000 PABPC5Q96DU9 382 aaKnown RBP15.1■□□□□ 0.01
RTN3-205ENST00000356000 FAM120BQ96EK7 910 aaKnown RBP15.1■□□□□ 0.01
RTN3-205ENST00000356000 GPR171O14626 319 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 SLC7A4O43246 635 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 TPST2O60704 377 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 PAGE1O75459 146 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 S100A8P05109 93 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 ZNF806P0C7X5 589 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 PRDX3P30048 256 aaKnown RBP15.09■□□□□ 0.01
RTN3-205ENST00000356000 LCN1P31025 176 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 RORAP35398 523 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 C3orf38Q5JPI3 329 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 FAM198BQ6UWH4 519 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 SUSD1Q6UWL2 747 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 Q6ZSR9 355 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 KRT77Q7Z794 578 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 PDZD3Q86UT5 571 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 FAM131BQ86XD5 332 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 LIX1Q8N485 282 aa15.09■□□□□ 0.01
RTN3-205ENST00000356000 TBC1D19Q8N5T2 526 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms