RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 TREX2Q9BQ50 279 aaPredicted RBP14.38□□□□□ -0.11
LMX1B-201ENST00000355497 KATNBL1Q9H079 304 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 ATG5Q9H1Y0 275 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 TMEM185BQ9H7F4 350 aa14.38□□□□□ -0.11
LMX1B-201ENST00000355497 UPK3BL1B0FP48 263 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 UPK3BL2E5RIL1 263 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 CSF2P04141 144 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 KLK3P07288 261 aaPredicted RBP14.37□□□□□ -0.11
LMX1B-201ENST00000355497 UQCRC2P22695 453 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 KCNC3Q14003 757 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 ZNF181Q2M3W8 571 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 SLC35F1Q5T1Q4 408 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 TMIGD1Q6UXZ0 262 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 SLC6A7Q99884 636 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 CD244Q9BZW8 370 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 EIF5A2Q9GZV4 153 aaKnown RBP14.37□□□□□ -0.11
LMX1B-201ENST00000355497 CACNG4Q9UBN1 327 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 NUFIP1Q9UHK0 495 aaKnown RBP14.37□□□□□ -0.11
LMX1B-201ENST00000355497 PLAGL1Q9UM63 463 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 ATRNL1Q5VV63 1379 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 AHSGP02765 367 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 CD97P48960 835 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 ENTPD1P49961 510 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 MTFR2Q6P444 385 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 SLCO2A1Q92959 643 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 ZUFSPQ96AP4 578 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 ZNF701Q9NV72 531 aaPredicted RBP14.37□□□□□ -0.11
LMX1B-201ENST00000355497 DIP2CQ9Y2E4 1556 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 HRGP04196 525 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 IL1R2P27930 398 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 MAGEA11P43364 429 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 RAB8AP61006 207 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 TICAM1Q8IUC6 712 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 ZNF420Q8TAQ5 688 aaPredicted RBP14.37□□□□□ -0.11
LMX1B-201ENST00000355497 OR5B12Q96R08 314 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 COL5A2P05997 1499 aaPredicted RBP14.37□□□□□ -0.11
LMX1B-201ENST00000355497 PRSS51A0A1B0GVH4 220 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 J3KR12 359 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 CBLP22681 906 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 SPANXN4Q5MJ08 99 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 TFGQ92734 400 aaPredicted RBP14.37□□□□□ -0.11
LMX1B-201ENST00000355497 OR51B5Q9H339 312 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 IGLV3-22A0A075B6J6 115 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 EEF1E1O43324 174 aaKnown RBP14.37□□□□□ -0.11
LMX1B-201ENST00000355497 MT-ND2P03891 347 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 SLC26A5P58743 744 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 PLEKHG7Q6ZR37 379 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 REM2Q8IYK8 340 aaPredicted RBP14.37□□□□□ -0.11
LMX1B-201ENST00000355497 OR51G2Q8NGK0 314 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 HDAC2Q92769 488 aaKnown RBP14.37□□□□□ -0.11
LMX1B-201ENST00000355497 GPR22Q99680 433 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 TBCCD1Q9NVR7 557 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 DMAC2Q9NW81 257 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 TMPRSS11EQ9UL52 423 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 WDR45Q9Y484 360 aa14.37□□□□□ -0.11
LMX1B-201ENST00000355497 RBBP9O75884 186 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 ZNF35P13682 527 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 SELENOVP59797 346 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 POU6F2P78424 691 aaPredicted RBP14.36□□□□□ -0.11
LMX1B-201ENST00000355497 CCDC58Q4VC31 144 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 MCHR1Q99705 422 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 MRM3Q9HC36 420 aaKnown RBP14.36□□□□□ -0.11
LMX1B-201ENST00000355497 RPL10P27635 214 aaKnown RBP14.36□□□□□ -0.11
LMX1B-201ENST00000355497 GDF5P43026 501 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 PLP2Q04941 152 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 SFT2D3Q587I9 215 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 RABL3Q5HYI8 236 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 AGTRAPQ6RW13 159 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 ZNF550Q7Z398 422 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 ISOC1Q96CN7 298 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 C7orf34Q96L11 122 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 TSNAXQ99598 290 aaKnown RBP14.36□□□□□ -0.11
LMX1B-201ENST00000355497 PIGVQ9NUD9 493 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 DHDHQ9UQ10 334 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 YIPF1Q9Y548 306 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 KIAA1210Q9ULL0 1709 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 OTOL1A6NHN0 477 aaPredicted RBP14.36□□□□□ -0.11
LMX1B-201ENST00000355497 ZNF705EA8MWA4 302 aaPredicted RBP14.36□□□□□ -0.11
LMX1B-201ENST00000355497 F5H0A9 414 aaPredicted RBP14.36□□□□□ -0.11
LMX1B-201ENST00000355497 H2BFMP0C1H6 154 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 GDI1P31150 447 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 MLLT1Q03111 559 aaPredicted RBP14.36□□□□□ -0.11
LMX1B-201ENST00000355497 PMS2P3Q13401 168 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 TMEM69Q5SWH9 247 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 PPP2R2DQ66LE6 453 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 ARL14Q8N4G2 192 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 TMEM125Q96AQ2 219 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 FZD8Q9H461 694 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 PCDH10Q9P2E7 1040 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 HS3ST4Q9Y661 456 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 UNC119BA6NIH7 251 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 SYNGR4O95473 234 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 GBAP04062 536 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 ACVRL1P37023 503 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 SOX2P48431 317 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 SSTP61278 116 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 MRPL49Q13405 166 aaKnown RBP14.36□□□□□ -0.11
LMX1B-201ENST00000355497 PTCHD3Q3KNS1 767 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 TBC1D15Q8TC07 691 aa14.36□□□□□ -0.11
LMX1B-201ENST00000355497 THAP4Q8WY91 577 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms