RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 CDH16O75309 829 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 MAOAP21397 527 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 RAB38P57729 211 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 OR4D2P58180 307 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 PHEXP78562 749 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 TRAF3Q13114 568 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 ZRSR2Q15696 482 aaKnown RBP17.69■□□□□ 0.42
VPS72-201ENST00000354473 ERCC6LQ2NKX8 1250 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 SLC6A19Q695T7 634 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 JMJD6Q6NYC1 403 aaPredicted RBP17.69■□□□□ 0.42
VPS72-201ENST00000354473 EMBQ6PCB8 327 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 IGFL3Q6UXB1 125 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 ZNF793Q6ZN11 406 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 RIPOR1Q6ZS17 1223 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 CYP4X1Q8N118 509 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 AMER2Q8N7J2 671 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 FAM47BQ8NA70 645 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 OR2W6PQ8NHA6 318 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 BRIX1Q8TDN6 353 aaKnown RBP17.69■□□□□ 0.42
VPS72-201ENST00000354473 ZNF483Q8TF39 744 aaPredicted RBP17.69■□□□□ 0.42
VPS72-201ENST00000354473 PTCHD1Q96NR3 888 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 WDR77Q9BQA1 342 aaPredicted RBP17.69■□□□□ 0.42
VPS72-201ENST00000354473 TBCDQ9BTW9 1192 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 PRDM7Q9NQW5 492 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 LUZP4Q9P127 313 aa17.69■□□□□ 0.42
VPS72-201ENST00000354473 DLX3O60479 287 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 UQCRHP07919 91 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 ITGAMP11215 1152 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 ICAM2P13598 275 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 SSR2P43308 183 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 RAP1GDS1P52306 607 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 LIM2P55344 173 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 RPS13P62277 151 aaKnown RBP17.68■□□□□ 0.42
VPS72-201ENST00000354473 AP2B1P63010 937 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 HERVK_113P63132 956 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 ACTN3Q08043 901 aaPredicted RBP17.68■□□□□ 0.42
VPS72-201ENST00000354473 RASA2Q15283 850 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 BTBD16Q32M84 506 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 PLAG1Q6DJT9 500 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 PAPD4Q6PIY7 484 aaKnown RBP17.68■□□□□ 0.42
VPS72-201ENST00000354473 ZADH2Q8N4Q0 377 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 SIRT6Q8N6T7 355 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 ADAMTS18Q8TE60 1221 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 NTMT1Q9BV86 223 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 C1QTNF3Q9BXJ4 246 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 ERVK-6Q9BXR3 956 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 PRDM9Q9NQV7 894 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 PTGFRNQ9P2B2 879 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 DCDC2Q9UHG0 476 aa17.68■□□□□ 0.42
VPS72-201ENST00000354473 CNTRLQ7Z7A1 2325 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 IGKV3D-11A0A0A0MRZ8 115 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 GLRA3O75311 464 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 TSPAN8P19075 237 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 ATP5F1P24539 256 aaPredicted RBP17.67■□□□□ 0.42
VPS72-201ENST00000354473 ATP5A1P25705 553 aaKnown RBP17.67■□□□□ 0.42
VPS72-201ENST00000354473 NEK2P51955 445 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 CDH13P55290 713 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 AP5B1Q2VPB7 878 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 CRB2Q5IJ48 1285 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 DEPDC1Q5TB30 811 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 ISLR2Q6UXK2 745 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 LINC00696Q6ZRV3 163 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 SH2D5Q6ZV89 423 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 ACOT4Q8N9L9 421 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 ARMC2Q8NEN0 867 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 WDR20Q8TBZ3 569 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 PPP4R1Q8TF05 950 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 PSMF1Q92530 271 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 CAVIN3Q969G5 261 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 PNPLA2Q96AD5 504 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 TMEM237Q96Q45 408 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 CSF3RQ99062 836 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 LPAR4Q99677 370 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 CENPKQ9BS16 269 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 EPS8L2Q9H6S3 715 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 NECTIN3Q9NQS3 549 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 EMCNQ9ULC0 261 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 DAPP1Q9UN19 280 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 MRPS33Q9Y291 106 aaKnown RBP17.67■□□□□ 0.42
VPS72-201ENST00000354473 MMACHCQ9Y4U1 282 aa17.67■□□□□ 0.42
VPS72-201ENST00000354473 A0A1B0GTL3 188 aa17.66■□□□□ 0.42
VPS72-201ENST00000354473 TLDC2A0PJX2 215 aa17.66■□□□□ 0.42
VPS72-201ENST00000354473 TTLL8A6PVC2 850 aa17.66■□□□□ 0.42
VPS72-201ENST00000354473 SORBS2O94875 1100 aaKnown RBP17.66■□□□□ 0.42
VPS72-201ENST00000354473 OTCP00480 354 aa17.66■□□□□ 0.42
VPS72-201ENST00000354473 NUDT17P0C025 328 aa17.66■□□□□ 0.42
VPS72-201ENST00000354473 HIST1H1TP22492 207 aaPredicted RBP17.66■□□□□ 0.42
VPS72-201ENST00000354473 PTX3P26022 381 aaPredicted RBP17.66■□□□□ 0.42
VPS72-201ENST00000354473 SOX11P35716 441 aa17.66■□□□□ 0.42
VPS72-201ENST00000354473 HNRNPFP52597 415 aaKnown RBP17.66■□□□□ 0.42
VPS72-201ENST00000354473 MLLT10P55197 1068 aa17.66■□□□□ 0.42
VPS72-201ENST00000354473 IFFO1Q0D2I5 559 aa17.66■□□□□ 0.42
VPS72-201ENST00000354473 MFAP5Q13361 173 aa17.66■□□□□ 0.42
VPS72-201ENST00000354473 RCN2Q14257 317 aa17.66■□□□□ 0.42
VPS72-201ENST00000354473 EXT1Q16394 746 aa17.66■□□□□ 0.42
VPS72-201ENST00000354473 ZNF678Q5SXM1 525 aa17.66■□□□□ 0.42
VPS72-201ENST00000354473 TTC19Q6DKK2 380 aaPredicted RBP17.66■□□□□ 0.42
VPS72-201ENST00000354473 IGFL2Q6UWQ7 119 aa17.66■□□□□ 0.42
VPS72-201ENST00000354473 MILR1Q7Z6M3 343 aa17.66■□□□□ 0.42
VPS72-201ENST00000354473 SLC22A9Q8IVM8 553 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms