RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 TIMM50Q3ZCQ8 353 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 GDPD3Q7L5L3 318 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 RNF130Q86XS8 419 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 PPCDCQ96CD2 204 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 WDR34Q96EX3 536 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 MGLLQ99685 303 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 TAPBPLQ9BX59 468 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 PNMA8CA0A1B0GUJ8 204 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 DYRK3O43781 588 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 ATG13O75143 517 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 GADD45GO95257 159 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 DNTTP04053 509 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 MAGP20916 626 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 SOX6P35712 828 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 PCYT1AP49585 367 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 SLC5A12Q1EHB4 618 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 KLHL17Q6TDP4 642 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 CCBE1Q6UXH8 406 aaPredicted RBP23.47■■□□□ 1.35
CPNE1-202ENST00000352393 AQP11Q8NBQ7 271 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 BTN2A2Q8WVV5 523 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 SDHCQ99643 169 aaPredicted RBP23.47■■□□□ 1.35
CPNE1-202ENST00000352393 TRIM39Q9HCM9 518 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 MYNNQ9NPC7 610 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 DMRT3Q9NQL9 472 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 SH2B3Q9UQQ2 575 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 MAP4K5Q9Y4K4 846 aa23.47■■□□□ 1.35
CPNE1-202ENST00000352393 TRAV19A0A0A6YYK7 116 aa23.46■■□□□ 1.35
CPNE1-202ENST00000352393 FOXE1O00358 373 aaPredicted RBP23.46■■□□□ 1.35
CPNE1-202ENST00000352393 MPZL2O60487 215 aa23.46■■□□□ 1.35
CPNE1-202ENST00000352393 KLHL18O94889 574 aa23.46■■□□□ 1.35
CPNE1-202ENST00000352393 IFNA14P01570 189 aa23.46■■□□□ 1.35
CPNE1-202ENST00000352393 GBAP04062 536 aa23.46■■□□□ 1.35
CPNE1-202ENST00000352393 SLC15A1P46059 708 aa23.46■■□□□ 1.35
CPNE1-202ENST00000352393 TBPL1P62380 186 aa23.46■■□□□ 1.35
CPNE1-202ENST00000352393 SPOUT1Q5T280 376 aaKnown RBP23.46■■□□□ 1.35
CPNE1-202ENST00000352393 OR5AK3PQ8NH89 298 aa23.46■■□□□ 1.35
CPNE1-202ENST00000352393 TMEM121BQ9BXQ6 578 aaPredicted RBP23.46■■□□□ 1.35
CPNE1-202ENST00000352393 ROGDIQ9GZN7 287 aa23.46■■□□□ 1.35
CPNE1-202ENST00000352393 RBMX2Q9Y388 322 aaKnown RBP23.46■■□□□ 1.35
CPNE1-202ENST00000352393 A8MU76 341 aa23.45■■□□□ 1.35
CPNE1-202ENST00000352393 LOC110117498-PIK3R3F6TDL0 507 aa23.45■■□□□ 1.35
CPNE1-202ENST00000352393 CCRL2O00421 344 aa23.45■■□□□ 1.35
CPNE1-202ENST00000352393 CHMP24386 653 aa23.45■■□□□ 1.35
CPNE1-202ENST00000352393 RPL3P39023 403 aaKnown RBP23.45■■□□□ 1.35
CPNE1-202ENST00000352393 MAPK9P45984 424 aa23.45■■□□□ 1.35
CPNE1-202ENST00000352393 SSX1Q16384 188 aa23.45■■□□□ 1.35
CPNE1-202ENST00000352393 SPANXN2Q5MJ10 180 aa23.45■■□□□ 1.35
CPNE1-202ENST00000352393 FAM71E1Q6IPT2 247 aa23.45■■□□□ 1.35
CPNE1-202ENST00000352393 ZNF770Q6IQ21 691 aaPredicted RBP23.45■■□□□ 1.35
CPNE1-202ENST00000352393 LAS2Q8IYD9 372 aa23.45■■□□□ 1.35
CPNE1-202ENST00000352393 NLGN4XQ8N0W4 816 aa23.45■■□□□ 1.35
CPNE1-202ENST00000352393 ZNF513Q8N8E2 541 aaPredicted RBP23.45■■□□□ 1.35
CPNE1-202ENST00000352393 WDR48Q8TAF3 677 aa23.45■■□□□ 1.35
CPNE1-202ENST00000352393 C16orf78Q8WTQ4 265 aa23.45■■□□□ 1.35
CPNE1-202ENST00000352393 PIK3R3Q92569 461 aa23.45■■□□□ 1.35
CPNE1-202ENST00000352393 ZNF558Q96NG5 402 aa23.45■■□□□ 1.35
CPNE1-202ENST00000352393 WRAP53Q9BUR4 548 aaKnown RBP23.45■■□□□ 1.35
CPNE1-202ENST00000352393 SMG9Q9H0W8 520 aaKnown RBP23.45■■□□□ 1.35
CPNE1-202ENST00000352393 TAS2R9Q9NYW1 312 aa23.45■■□□□ 1.35
CPNE1-202ENST00000352393 KLHL3Q9UH77 587 aa23.45■■□□□ 1.35
CPNE1-202ENST00000352393 ANGPT4Q9Y264 503 aa23.45■■□□□ 1.35
CPNE1-202ENST00000352393 ARHGAP33O14559 1287 aa23.45■■□□□ 1.34
CPNE1-202ENST00000352393 PIPP12273 146 aaPredicted RBP23.45■■□□□ 1.34
CPNE1-202ENST00000352393 CHI3L1P36222 383 aaPredicted RBP23.45■■□□□ 1.34
CPNE1-202ENST00000352393 CRISP1P54107 249 aa23.45■■□□□ 1.34
CPNE1-202ENST00000352393 DEFA1P59665 94 aa23.45■■□□□ 1.34
CPNE1-202ENST00000352393 DEFA3P59666 94 aa23.45■■□□□ 1.34
CPNE1-202ENST00000352393 SLBPQ14493 270 aaKnown RBP eCLIP23.45■■□□□ 1.34
CPNE1-202ENST00000352393 DMC1Q14565 340 aa23.45■■□□□ 1.34
CPNE1-202ENST00000352393 GANABQ14697 944 aaKnown RBP23.45■■□□□ 1.34
CPNE1-202ENST00000352393 MED22Q15528 200 aa23.45■■□□□ 1.34
CPNE1-202ENST00000352393 PRSS53Q2L4Q9 553 aa23.45■■□□□ 1.34
CPNE1-202ENST00000352393 PLAG1Q6DJT9 500 aa23.45■■□□□ 1.34
CPNE1-202ENST00000352393 ZNF480Q8WV37 535 aa23.45■■□□□ 1.34
CPNE1-202ENST00000352393 HHIPL1Q96JK4 782 aa23.45■■□□□ 1.34
CPNE1-202ENST00000352393 VPS35Q96QK1 796 aa23.45■■□□□ 1.34
CPNE1-202ENST00000352393 YME1L1Q96TA2 773 aa23.45■■□□□ 1.34
CPNE1-202ENST00000352393 RC3H2Q9HBD1 1191 aaKnown RBP23.45■■□□□ 1.34
CPNE1-202ENST00000352393 FBXL12Q9NXK8 326 aa23.45■■□□□ 1.34
CPNE1-202ENST00000352393 EHD3Q9NZN3 535 aa23.45■■□□□ 1.34
CPNE1-202ENST00000352393 KCND3Q9UK17 655 aa23.45■■□□□ 1.34
CPNE1-202ENST00000352393 DSPPQ9NZW4 1301 aa23.45■■□□□ 1.34
CPNE1-202ENST00000352393 TRBC2A0A5B9 178 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 INHAP05111 366 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 GJA1P17302 382 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 RHCEP18577 417 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 PDHA2P29803 388 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 SLC44A2Q8IWA5 706 aaPredicted RBP23.44■■□□□ 1.34
CPNE1-202ENST00000352393 NMNAT1Q9HAN9 279 aaPredicted RBP23.44■■□□□ 1.34
CPNE1-202ENST00000352393 SIAEQ9HAT2 523 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 CLN6Q9NWW5 311 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 A0A075B6Q4 140 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 CNR2P34972 360 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 CCL23P55773 120 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 C2orf80Q0P641 193 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 PTCHD4Q6ZW05 846 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 WDR36Q8NI36 951 aaKnown RBP23.44■■□□□ 1.34
CPNE1-202ENST00000352393 GLYATL1Q969I3 302 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 FOPNLQ96NB1 174 aa23.44■■□□□ 1.34
CPNE1-202ENST00000352393 TRNT1Q96Q11 434 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms