RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 TRBV4-1A0A0J9YWV2 114 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 ZBBXA8MT70 800 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 WWP2O00308 870 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 KPNA3O00505 521 aaPredicted RBP5.77□□□□□ -1.49
CLCN3-201ENST00000347613 FAM20BO75063 409 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 CD36P16671 472 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 TIA1P31483 386 aaKnown RBP eCLIP5.77□□□□□ -1.492e-6■■■□□ 18.6
CLCN3-201ENST00000347613 MAPK8P45983 427 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 SRSF11Q05519 484 aaKnown RBP5.77□□□□□ -1.49
CLCN3-201ENST00000347613 CSTF3Q12996 717 aaKnown RBP5.77□□□□□ -1.49
CLCN3-201ENST00000347613 DHCR24Q15392 516 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 ZNF805Q5CZA5 627 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 CDKL4Q5MAI5 379 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 C9orf64Q5T6V5 341 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 FAM71E1Q6IPT2 247 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 SDE2Q6IQ49 451 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 GALNT13Q8IUC8 556 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 SIMC1Q8NDZ2 872 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 OR6Q1Q8NGQ2 317 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 PHOX2BQ99453 314 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 DOHHQ9BU89 302 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 DMRT3Q9NQL9 472 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 FKBP14Q9NWM8 211 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 SERGEFQ9UGK8 458 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 CLEC2DQ9UHP7 191 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 IGKV1-8A0A0C4DH67 115 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 TSPAN11A1L157 253 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 EVPLLA8MZ36 301 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 CFAP99D6REC4 459 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 PLPP1O14494 284 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 SLC16A5O15375 505 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 TLL1O43897 1013 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 ELFN1P0C7U0 828 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 ALPPL2P10696 532 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 LAG3P18627 525 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 SSTR4P31391 388 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 SOX9P48436 509 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 PTPN5P54829 565 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 AP1S2P56377 157 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 C21orf58P58505 322 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 RPS3AP61247 264 aaKnown RBP5.77□□□□□ -1.49
CLCN3-201ENST00000347613 C2orf80Q0P641 193 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 ZNF770Q6IQ21 691 aaPredicted RBP5.77□□□□□ -1.49
CLCN3-201ENST00000347613 DPPA4Q7L190 304 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 PAGE2Q7Z2X7 111 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 UBE3DQ7Z6J8 389 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 ADGRD2Q7Z7M1 963 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 ZNF605Q86T29 641 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 HORMAD1Q86X24 394 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.77□□□□□ -1.49
CLCN3-201ENST00000347613 SYTL1Q8IYJ3 562 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 HORMAD2Q8N7B1 307 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 MRPL43Q8N983 215 aaKnown RBP5.77□□□□□ -1.49
CLCN3-201ENST00000347613 RHOXF1Q8NHV9 184 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 MIPOL1Q8TD10 442 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 CSGALNACT1Q8TDX6 532 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 ZNF707Q96C28 371 aaPredicted RBP5.77□□□□□ -1.49
CLCN3-201ENST00000347613 SLC6A18Q96N87 628 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 F2RL3Q96RI0 385 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 GABARAPL3Q9BY60 117 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 CEP44Q9C0F1 390 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 MVB12BQ9H7P6 319 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 PSORS1C1Q9UIG5 152 aa5.77□□□□□ -1.49
CLCN3-201ENST00000347613 RUVBL1Q9Y265 456 aaKnown RBP5.77□□□□□ -1.49
CLCN3-201ENST00000347613 SOX14O95416 240 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 C9P02748 559 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 TP53P04637 393 aaPredicted RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 GTF2E2P29084 291 aaKnown RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 TTKP33981 857 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 HNF4AP41235 474 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 IDH2P48735 452 aaKnown RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 DCDC1P59894 354 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 SP140Q13342 867 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 PDE7AQ13946 482 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 INAQ16352 499 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 FAM109BQ6ICB4 259 aaPredicted RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 SPATC1Q76KD6 591 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 CAMKMTQ7Z624 323 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 DNAJC22Q8N4W6 341 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 LINC01555Q8NAE3 123 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 OR5D16Q8NGK9 328 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 CLP1Q92989 425 aaKnown RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 TMEM159Q96B96 161 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 ZG16BQ96DA0 208 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 ARSGQ96EG1 525 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 Q96MT0 163 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 ZNF347Q96SE7 839 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 SDHCQ99643 169 aaPredicted RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 CDADC1Q9BWV3 514 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 SGPP1Q9BX95 441 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 TMEM74BQ9NUR3 256 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 FAM120CQ9NX05 1096 aaKnown RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 TEX10Q9NXF1 929 aaPredicted RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 BTNL2Q9UIR0 455 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 PADI2Q9Y2J8 665 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 A0A1W2PPV9 198 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 PABPN1LA6NDY0 278 aaKnown RBP5.76□□□□□ -1.49
CLCN3-201ENST00000347613 GLOD5A6NK44 160 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 HEPACAM2A8MVW5 462 aa5.76□□□□□ -1.49
CLCN3-201ENST00000347613 H3BM21 787 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms