RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 TTLL10Q6ZVT0 673 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 PAGE2Q7Z2X7 111 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 TREML1Q86YW5 311 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 ZCCHC7Q8N3Z6 543 aaKnown RBP18■□□□□ 0.47
CHMP4A-201ENST00000347519 KRTCAP2Q8N6L1 136 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 CDC26Q8NHZ8 85 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 ZDHHC19Q8WVZ1 309 aaPredicted RBP18■□□□□ 0.47
CHMP4A-201ENST00000347519 TM4SF18Q96CE8 201 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 SERINC2Q96SA4 455 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 MAPKAP1Q9BPZ7 522 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 COPS7BQ9H9Q2 264 aaPredicted RBP18■□□□□ 0.47
CHMP4A-201ENST00000347519 ANKHQ9HCJ1 492 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 FBXO8Q9NRD0 319 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 SDR39U1Q9NRG7 319 aaPredicted RBP18■□□□□ 0.47
CHMP4A-201ENST00000347519 SLC39A1Q9NY26 324 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 ASB4Q9Y574 426 aa18■□□□□ 0.47
CHMP4A-201ENST00000347519 CACNA1AO00555 2505 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 CCDC187A0A096LP49 1063 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 GNG14A0A1W2PPG7 69 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 POLR1CO15160 346 aaPredicted RBP17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 LRATO95237 230 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 FAM58BPP0C7Q3 252 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 IDO1P14902 403 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 ZNF28P17035 718 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 MAPK1P28482 360 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 ZFP36L2P47974 494 aaKnown RBP17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 ATP4BP51164 291 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 MAPK12P53778 367 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 TAS2R50P59544 299 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 KLF10Q13118 480 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 FAM53BQ14153 422 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 SQLEQ14534 574 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 IL11RAQ14626 422 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 MUM1Q2TAK8 710 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 C1orf189Q5VU69 101 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 PPP1R3BQ86XI6 285 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 FUNDC1Q8IVP5 155 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 FITM2Q8N6M3 262 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 ADAMTS14Q8WXS8 1223 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 GFM2Q969S9 779 aaKnown RBP17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 NDC1Q9BTX1 674 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 CCDC106Q9BWC9 280 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 TEX10Q9NXF1 929 aaPredicted RBP17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 KCMF1Q9P0J7 381 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 PISDQ9UG56 409 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 FBXW2Q9UKT8 454 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 ATG4BQ9Y4P1 393 aa17.99■□□□□ 0.47
CHMP4A-201ENST00000347519 A0A1W2PR48 441 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 DSCR3O14972 297 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 AKAP10O43572 662 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 CCDC22O60826 627 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 PRKRAO75569 313 aaKnown RBP17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 SCRG1O75711 98 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 NTRK1P04629 796 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 IL3P08700 152 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 ATXN8OSP0DMR3 200 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 ALAS2P22557 587 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 TSFMP43897 325 aaKnown RBP17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 OR1D4P47884 311 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 MRPL19P49406 292 aaKnown RBP17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 MAPK10P53779 464 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 MAT1AQ00266 395 aaKnown RBP17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 ZNF763Q0D2J5 394 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 SYT16Q17RD7 645 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 PRSS53Q2L4Q9 553 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 FAM214AQ32MH5 1076 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 FAM71E1Q6IPT2 247 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 FOXR1Q6PIV2 292 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 TMEM126BQ8IUX1 230 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 CA13Q8N1Q1 262 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 MIER2Q8N344 545 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 PROKR1Q8TCW9 393 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 RTKNQ9BST9 563 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 ACTR5Q9H9F9 607 aaPredicted RBP17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 MYNNQ9NPC7 610 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 AKAP7Q9P0M2 348 aaPredicted RBP17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 HCN3Q9P1Z3 774 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 NDOR1Q9UHB4 597 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 MAU2Q9Y6X3 613 aa17.98■□□□□ 0.47
CHMP4A-201ENST00000347519 WASHC1A8K0Z3 465 aa17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 B3GALT2O43825 422 aa17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 DCTN3O75935 186 aa17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 NSA2O95478 260 aaKnown RBP17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 PIK3R1P27986 724 aa17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 LIM2P55344 173 aa17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 CLDN8P56748 225 aa17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 SLC9A5Q14940 896 aa17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 RPS6KA2Q15349 733 aa17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 C3orf38Q5JPI3 329 aa17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 C18orf63Q68DL7 685 aa17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 TMPRSS12Q86WS5 348 aa17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 RIMKLAQ8IXN7 391 aa17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 CACTIN-AS1Q8N1I8 211 aa17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 ERP27Q96DN0 273 aa17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 MMABQ96EY8 250 aaPredicted RBP17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 CSF3RQ99062 836 aa17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 ROGDIQ9GZN7 287 aa17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 SATB2Q9UPW6 733 aa17.97■□□□□ 0.47
CHMP4A-201ENST00000347519 B3GALT1Q9Y5Z6 326 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms