RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 UBXN8O00124 270 aa15.18■□□□□ 0.02
RAB5C-201ENST00000346213 ZNF195O14628 629 aa15.18■□□□□ 0.02
RAB5C-201ENST00000346213 NDUFS4O43181 175 aa15.18■□□□□ 0.02
RAB5C-201ENST00000346213 KLHL18O94889 574 aa15.18■□□□□ 0.02
RAB5C-201ENST00000346213 UNC5CO95185 931 aa15.18■□□□□ 0.02
RAB5C-201ENST00000346213 NSA2O95478 260 aaKnown RBP15.18■□□□□ 0.02
RAB5C-201ENST00000346213 ANXA5P08758 320 aa15.18■□□□□ 0.02
RAB5C-201ENST00000346213 HRH2P25021 359 aa15.18■□□□□ 0.02
RAB5C-201ENST00000346213 PGDP52209 483 aa15.18■□□□□ 0.02
RAB5C-201ENST00000346213 KLRB1Q12918 225 aa15.18■□□□□ 0.02
RAB5C-201ENST00000346213 PARP9Q8IXQ6 854 aa15.18■□□□□ 0.02
RAB5C-201ENST00000346213 PDPRQ8NCN5 879 aa15.18■□□□□ 0.02
RAB5C-201ENST00000346213 RHEBL1Q8TAI7 183 aa15.18■□□□□ 0.02
RAB5C-201ENST00000346213 MVB12AQ96EY5 273 aa15.18■□□□□ 0.02
RAB5C-201ENST00000346213 TGIF2Q9GZN2 237 aa15.18■□□□□ 0.02
RAB5C-201ENST00000346213 ILKAPQ9H0C8 392 aaPredicted RBP15.18■□□□□ 0.02
RAB5C-201ENST00000346213 RASSF4Q9H2L5 321 aa15.18■□□□□ 0.02
RAB5C-201ENST00000346213 LANCL2Q9NS86 450 aa15.18■□□□□ 0.02
RAB5C-201ENST00000346213 GPR83Q9NYM4 423 aa15.18■□□□□ 0.02
RAB5C-201ENST00000346213 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.18■□□□□ 0.02
RAB5C-201ENST00000346213 ASH1LQ9NR48 2969 aaKnown RBP15.17■□□□□ 0.02
RAB5C-201ENST00000346213 CFAP73A6NFT4 308 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 A8MT66 165 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 IPO13O94829 963 aaKnown RBP15.17■□□□□ 0.02
RAB5C-201ENST00000346213 ZNF888P0CJ79 500 aaPredicted RBP15.17■□□□□ 0.02
RAB5C-201ENST00000346213 HNRNPH1P31943 449 aaKnown RBP15.17■□□□□ 0.02
RAB5C-201ENST00000346213 GGT5P36269 586 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 MYBPC3Q14896 1274 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 PCOLCEQ15113 449 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 RBBP7Q16576 425 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 SLC6A19Q695T7 634 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 FRA10AC1Q70Z53 315 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 GPSM1Q86YR5 675 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 C10orf67Q8IYJ2 551 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 ZNF781Q8N8C0 355 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 NT5CQ8TCD5 201 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 ATL1Q8WXF7 558 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 PSMF1Q92530 271 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 CNDP1Q96KN2 507 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 YIPF2Q9BWQ6 316 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 TRIM54Q9BYV2 358 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 SLC6A16Q9GZN6 736 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 PELI2Q9HAT8 420 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 ZNF160Q9HCG1 818 aa15.17■□□□□ 0.02
RAB5C-201ENST00000346213 PRRC2CQ9Y520 2896 aaKnown RBP15.17■□□□□ 0.02
RAB5C-201ENST00000346213 A0A1W2PQ72 361 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 CCDC189A1A4V9 331 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 FCHO1O14526 889 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 HNRNPCL1O60812 293 aaKnown RBP15.16■□□□□ 0.02
RAB5C-201ENST00000346213 CCDC22O60826 627 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 SMIM10L1P0DMW3 83 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 T-ENOLP0DO92 83 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 HNF4AP41235 474 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 SOX8P57073 446 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 ATP6V0D1P61421 351 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 FOXK1P85037 733 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 SRSF1Q07955 248 aaKnown RBP eCLIP15.16■□□□□ 0.02
RAB5C-201ENST00000346213 SLBPQ14493 270 aaKnown RBP eCLIP15.16■□□□□ 0.02
RAB5C-201ENST00000346213 KRT72Q14CN4 511 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 DEFB134Q4QY38 66 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 ARL13AQ5H913 290 aaPredicted RBP15.16■□□□□ 0.02
RAB5C-201ENST00000346213 TMEM205Q6UW68 189 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 ASRGL1Q7L266 308 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 MAVSQ7Z434 540 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 OR51Q1Q8NH59 317 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 UTP15Q8TED0 518 aaKnown RBP15.16■□□□□ 0.02
RAB5C-201ENST00000346213 STON2Q8WXE9 905 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 TSLPQ969D9 159 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 THAP11Q96EK4 314 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 SMIM10Q96HG1 83 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 WDR77Q9BQA1 342 aaPredicted RBP15.16■□□□□ 0.02
RAB5C-201ENST00000346213 EBF4Q9BQW3 602 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 SEMA3GQ9NS98 782 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 ANAPC2Q9UJX6 822 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 NXT1Q9UKK6 140 aaKnown RBP15.16■□□□□ 0.02
RAB5C-201ENST00000346213 ZNF490Q9ULM2 529 aaPredicted RBP15.16■□□□□ 0.02
RAB5C-201ENST00000346213 IGHV1-45A0A0A0MS14 117 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 A0A0G2JN53 185 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 SLCO1B7G3V0H7 640 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 H0YHG0 523 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 GALR3O60755 368 aaPredicted RBP15.16■□□□□ 0.02
RAB5C-201ENST00000346213 CDC123O75794 336 aaPredicted RBP15.16■□□□□ 0.02
RAB5C-201ENST00000346213 CHRNGP07510 517 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 SERPINA6P08185 405 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 PIM1P11309 404 aaPredicted RBP15.16■□□□□ 0.02
RAB5C-201ENST00000346213 XCR1P46094 333 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 RPL14P50914 215 aaKnown RBP15.16■□□□□ 0.02
RAB5C-201ENST00000346213 RAB8AP61006 207 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 OCA2Q04671 838 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 JMJD6Q6NYC1 403 aaPredicted RBP15.16■□□□□ 0.02
RAB5C-201ENST00000346213 RNF175Q8N4F7 328 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 CAMKVQ8NCB2 501 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 MIB2Q96AX9 1013 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 RILPQ96NA2 401 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 MKKSQ9NPJ1 570 aaPredicted RBP15.16■□□□□ 0.02
RAB5C-201ENST00000346213 MKL2Q9ULH7 1088 aa15.16■□□□□ 0.02
RAB5C-201ENST00000346213 SCN3AQ9NY46 2000 aa15.15■□□□□ 0.02
RAB5C-201ENST00000346213 LOC102723996A0A087X1L8 192 aa15.15■□□□□ 0.02
RAB5C-201ENST00000346213 H0YIG0 161 aa15.15■□□□□ 0.02
RAB5C-201ENST00000346213 PEX12O00623 359 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms