RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 F2RL3Q96RI0 385 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 NIPSNAP1Q9BPW8 284 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 RSPO3Q9BXY4 272 aaPredicted RBP14.75□□□□□ -0.05
UPF3B-202ENST00000345865 EPS8L2Q9H6S3 715 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 CXorf36Q9H7Y0 433 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 ACOT13Q9NPJ3 140 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 SCN3BQ9NY72 215 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 RNF6Q9Y252 685 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 TBC1D3BA6NDS4 549 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 IGLON5A6NGN9 336 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 GRXCR1A8MXD5 290 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 GABARAPO95166 117 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 RB1P06400 928 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 EPHX1P07099 455 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 KELP23276 732 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 DRD3P35462 400 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 OPRD1P41143 372 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 CDH12P55289 794 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 PCBP3P57721 371 aaKnown RBP14.75□□□□□ -0.05
UPF3B-202ENST00000345865 FADDQ13158 208 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 DGCR6Q14129 220 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 CLCA4Q14CN2 919 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 ADPRMQ3LIE5 342 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 IFI44LQ53G44 452 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 SYT6Q5T7P8 510 aaPredicted RBP14.75□□□□□ -0.05
UPF3B-202ENST00000345865 DUS1LQ6P1R4 473 aaKnown RBP14.75□□□□□ -0.05
UPF3B-202ENST00000345865 FBXO46Q6PJ61 603 aaPredicted RBP14.75□□□□□ -0.05
UPF3B-202ENST00000345865 Q6ZNX1 250 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 OXR1Q8N573 874 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 GIPC3Q8TF64 312 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 HERVK_113Q902F9 699 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 SMARCD2Q92925 531 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 ALOXE3Q9BYJ1 711 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 TSC22D4Q9Y3Q8 395 aa14.75□□□□□ -0.05
UPF3B-202ENST00000345865 FEZF1A0PJY2 475 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 POU2F2P09086 479 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 ERGP11308 486 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 ALDH4A1P30038 563 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 SOAT1P35610 550 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 C21orf59P57076 290 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 TAS2R38P59533 333 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 LSM3P62310 102 aaKnown RBP14.74□□□□□ -0.05
UPF3B-202ENST00000345865 CDK3Q00526 305 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 RBBP4Q09028 425 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 EXOC3L2Q2M3D2 409 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 WSCD2Q2TBF2 565 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 ADAMTSL4Q6UY14 1074 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 AHSA2Q719I0 299 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 DCUN1D3Q8IWE4 304 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 OR10G2Q8NGC3 310 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 SUSD6Q92537 303 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 ABTB1Q969K4 478 aaPredicted RBP14.74□□□□□ -0.05
UPF3B-202ENST00000345865 MTERF3Q96E29 417 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 CHFRQ96EP1 664 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 C5AR2Q9P296 337 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 GOLGA4Q13439 2230 aaKnown RBP14.74□□□□□ -0.05
UPF3B-202ENST00000345865 ATG2BQ96BY7 2078 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 ADAMDEC1O15204 470 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 RGS10O43665 173 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 PFDN1O60925 122 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 ARAFP10398 606 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 RPL3P39023 403 aaKnown RBP14.74□□□□□ -0.05
UPF3B-202ENST00000345865 RPS26P62854 115 aaKnown RBP14.74□□□□□ -0.05
UPF3B-202ENST00000345865 SPIBQ01892 262 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 MVKQ03426 396 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 CRB2Q5IJ48 1285 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 FAM109BQ6ICB4 259 aaPredicted RBP14.74□□□□□ -0.05
UPF3B-202ENST00000345865 TRIM40Q6P9F5 258 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 CCDC103Q8IW40 242 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 OR9Q2Q8NGE9 314 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 OR5K2Q8NHB8 316 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 NDNFQ8TB73 568 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 HDAC8Q9BY41 377 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 LHX9Q9NQ69 397 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 MIEF1Q9NQG6 463 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 SH3GLB1Q9Y371 365 aa14.74□□□□□ -0.05
UPF3B-202ENST00000345865 ATG2AQ2TAZ0 1938 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 A0A1W2PPV9 198 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 PCDH17O14917 1159 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 LCKP06239 509 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 FCARP24071 287 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 PSMB9P28065 219 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 BSGP35613 385 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 RANBP1P43487 201 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 DUSP7Q16829 419 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 DEPDC1Q5TB30 811 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 EGFLAMQ63HQ2 1017 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 METRNLQ641Q3 311 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 PSRC1Q6PGN9 363 aaPredicted RBP14.73□□□□□ -0.05
UPF3B-202ENST00000345865 KRT78Q8N1N4 520 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 KIAA1958Q8N8K9 716 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 PHOSPHO2Q8TCD6 241 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 UBE2E3Q969T4 207 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 TM4SF18Q96CE8 201 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 RHBGQ9H310 441 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 AMBNQ9NP70 447 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 MBNL1Q9NR56 388 aaKnown RBP14.73□□□□□ -0.05
UPF3B-202ENST00000345865 THSD1Q9NS62 852 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 RHBDL2Q9NX52 303 aa14.73□□□□□ -0.05
UPF3B-202ENST00000345865 ICKQ9UPZ9 632 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms