RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 MAGEA10P43363 369 aaPredicted RBP12.74□□□□□ -0.37
CASC4-202ENST00000345795 ATP4BP51164 291 aa12.74□□□□□ -0.37
CASC4-202ENST00000345795 CCR8P51685 355 aa12.74□□□□□ -0.37
CASC4-202ENST00000345795 CLCN2P51788 898 aa12.74□□□□□ -0.37
CASC4-202ENST00000345795 C21orf59P57076 290 aa12.74□□□□□ -0.37
CASC4-202ENST00000345795 ZNF385BQ569K4 471 aa12.74□□□□□ -0.37
CASC4-202ENST00000345795 SLC35F1Q5T1Q4 408 aa12.74□□□□□ -0.37
CASC4-202ENST00000345795 CASP12Q6UXS9 341 aa12.74□□□□□ -0.37
CASC4-202ENST00000345795 PATL1Q86TB9 770 aaKnown RBP12.74□□□□□ -0.37
CASC4-202ENST00000345795 RBM45Q8IUH3 476 aaKnown RBP12.74□□□□□ -0.37
CASC4-202ENST00000345795 ZNF557Q8N988 423 aaPredicted RBP12.74□□□□□ -0.37
CASC4-202ENST00000345795 HTRA1Q92743 480 aa12.74□□□□□ -0.37
CASC4-202ENST00000345795 ASB16Q96NS5 453 aa12.74□□□□□ -0.37
CASC4-202ENST00000345795 MYADMQ96S97 322 aa12.74□□□□□ -0.37
CASC4-202ENST00000345795 SLC29A3Q9BZD2 475 aa12.74□□□□□ -0.37
CASC4-202ENST00000345795 TBC1D23Q9NUY8 699 aa12.74□□□□□ -0.37
CASC4-202ENST00000345795 FAM118AQ9NWS6 357 aa12.74□□□□□ -0.37
CASC4-202ENST00000345795 ST14Q9Y5Y6 855 aa12.74□□□□□ -0.37
CASC4-202ENST00000345795 BDP1A6H8Y1 2624 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 B4GALT2O60909 372 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 ALOX12P18054 663 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 ASMTP46597 345 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 CCT3P49368 545 aaKnown RBP12.73□□□□□ -0.37
CASC4-202ENST00000345795 NAA20P61599 178 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 MAP4K2Q12851 820 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 SLAMF1Q13291 335 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 EXOC3L2Q2M3D2 409 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 CCNJQ5T5M9 372 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 HENMT1Q5T8I9 393 aaKnown RBP12.73□□□□□ -0.37
CASC4-202ENST00000345795 ANXA8L1Q5VT79 327 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 TBC1D19Q8N5T2 526 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 GATSQ8NAP1 163 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 RPLP0P6Q8NHW5 317 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 GIPC3Q8TF64 312 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 RPL3LQ92901 407 aaKnown RBP12.73□□□□□ -0.37
CASC4-202ENST00000345795 ZUFSPQ96AP4 578 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 ISOC1Q96CN7 298 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 EFCAB11Q9BUY7 163 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 NTMT1Q9BV86 223 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 CNPPD1Q9BV87 410 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 FNDC11Q9BVV2 318 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 CLMPQ9H6B4 373 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 CHCHD3Q9NX63 227 aaKnown RBP12.73□□□□□ -0.37
CASC4-202ENST00000345795 GPR52Q9Y2T5 361 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 PIAS3Q9Y6X2 628 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 OR10H2O60403 315 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 RASAL1O95294 804 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 IGFBP1P08833 259 aaPredicted RBP12.73□□□□□ -0.37
CASC4-202ENST00000345795 PTPN5P54829 565 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 NR1D2Q14995 579 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 TOR1AIP1Q5JTV8 583 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 NXPE4Q6UWF7 544 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 DCUN1D3Q8IWE4 304 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 SLC5A8Q8N695 610 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 AMER3Q8N944 861 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 C16orf78Q8WTQ4 265 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 PDXPQ96GD0 296 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 SLC17A9Q9BYT1 436 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 TMEM168Q9H0V1 697 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 REEP4Q9H6H4 257 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 RLIMQ9NVW2 624 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 YBX2Q9Y2T7 364 aaKnown RBP12.73□□□□□ -0.37
CASC4-202ENST00000345795 CARNS1A5YM72 827 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 NUDT14O95848 222 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 DLGAP3O95886 979 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 NOS3P29474 1203 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 ERV3-1Q14264 604 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 HEPACAMQ14CZ8 416 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 TRIM16LQ309B1 348 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 INTS11Q5TA45 600 aaKnown RBP12.73□□□□□ -0.37
CASC4-202ENST00000345795 KLHL35Q6PF15 583 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 RNF44Q7L0R7 432 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 WDR36Q8NI36 951 aaKnown RBP12.73□□□□□ -0.37
CASC4-202ENST00000345795 TADA1Q96BN2 335 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 ZNF597Q96LX8 424 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 COPS4Q9BT78 406 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 GPR174Q9BXC1 333 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 WBP1LQ9NX94 342 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 MALT1Q9UDY8 824 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 CA14Q9ULX7 337 aa12.73□□□□□ -0.37
CASC4-202ENST00000345795 YY2O15391 372 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 NARSO43776 548 aaKnown RBP12.72□□□□□ -0.37
CASC4-202ENST00000345795 CCNDBP1O95273 360 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 PENKP01210 267 aaPredicted RBP12.72□□□□□ -0.37
CASC4-202ENST00000345795 SMIM18P0DKX4 95 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 UMPSP11172 480 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 BMP2P12643 396 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 IFNA8P32881 189 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 DSTNP60981 165 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 RPP38P78345 283 aaKnown RBP12.72□□□□□ -0.37
CASC4-202ENST00000345795 CHERPQ8IWX8 916 aaKnown RBP12.72□□□□□ -0.37
CASC4-202ENST00000345795 OR8H2Q8N162 312 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 CBARPQ8N350 705 aaPredicted RBP12.72□□□□□ -0.37
CASC4-202ENST00000345795 ZCCHC7Q8N3Z6 543 aaKnown RBP12.72□□□□□ -0.37
CASC4-202ENST00000345795 CAMKK1Q8N5S9 505 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 ZFP41Q8N8Y5 198 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 HM13Q8TCT9 377 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 INSM2Q96T92 566 aaPredicted RBP12.72□□□□□ -0.37
CASC4-202ENST00000345795 SEZ6LQ9BYH1 1024 aa12.72□□□□□ -0.37
CASC4-202ENST00000345795 CPEB1Q9BZB8 566 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms