RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 B3GNT3Q9Y2A9 372 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 XRN1Q8IZH2 1706 aaKnown RBP18.72■□□□□ 0.59
HDAC4-201ENST00000345617 UGT8Q16880 541 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 PDSS1Q5T2R2 415 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 FAM43BQ6ZT52 329 aaPredicted RBP18.72■□□□□ 0.59
HDAC4-201ENST00000345617 LGALS12Q96DT0 336 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 FBXL20Q96IG2 436 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 Q9N2J8 555 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 FAIMQ9NVQ4 179 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 DHDHQ9UQ10 334 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 AP1M2Q9Y6Q5 423 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 TRIP12Q14669 1992 aaPredicted RBP18.72■□□□□ 0.59
HDAC4-201ENST00000345617 TRIM64BA6NI03 449 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 TAS2R39P59534 338 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 CCDC58Q4VC31 144 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 GTPBP8Q8N3Z3 284 aaPredicted RBP18.72■□□□□ 0.59
HDAC4-201ENST00000345617 URM1Q9BTM9 101 aaKnown RBP18.72■□□□□ 0.59
HDAC4-201ENST00000345617 DOHHQ9BU89 302 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 PCDHB3Q9Y5E6 796 aa18.72■□□□□ 0.59
HDAC4-201ENST00000345617 NUP188Q5SRE5 1749 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 A8MT66 165 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 RDH16O75452 317 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 CNOT9Q92600 299 aaKnown RBP18.71■□□□□ 0.59
HDAC4-201ENST00000345617 TEX51A0A1B0GUA7 166 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 F8W036 122 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 NDUFS4O43181 175 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 OIP5O43482 229 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 PLGP00747 810 aaPredicted RBP18.71■□□□□ 0.59
HDAC4-201ENST00000345617 HLCSP50747 726 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 WDR4P57081 412 aaKnown RBP18.71■□□□□ 0.59
HDAC4-201ENST00000345617 BLOC1S1P78537 153 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 TAF10Q12962 218 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 OR13J1Q8NGT2 312 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 ZNF382Q96SR6 550 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 HEBP1Q9NRV9 189 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 ICKQ9UPZ9 632 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 A0A1W2PPW3 197 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 HHLA1C9JL84 531 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 CDH15P55291 814 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 EML3Q32P44 896 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 INTS5Q6P9B9 1019 aaKnown RBP18.71■□□□□ 0.59
HDAC4-201ENST00000345617 HACD2Q6Y1H2 254 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 KAZALD1Q96I82 304 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 BTBD2Q9BX70 525 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 CCM2LQ9NUG4 571 aaPredicted RBP18.71■□□□□ 0.59
HDAC4-201ENST00000345617 TMEM59LQ9UK28 342 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 MRPL49Q13405 166 aaKnown RBP18.71■□□□□ 0.59
HDAC4-201ENST00000345617 DEDD2Q8WXF8 326 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 MEAF6Q9HAF1 191 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 A0A096LPI6 279 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 CAMLGP49069 296 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 PLA2G16P53816 162 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 ITPK1Q13572 414 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 PRAMEF18Q5VWM3 479 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 OR8K5Q8NH50 307 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 KIAA1191Q96A73 305 aa18.71■□□□□ 0.59
HDAC4-201ENST00000345617 UQCRC2P22695 453 aa18.71■□□□□ 0.58
HDAC4-201ENST00000345617 INHBEP58166 350 aa18.71■□□□□ 0.58
HDAC4-201ENST00000345617 UBXN11Q5T124 520 aa18.71■□□□□ 0.58
HDAC4-201ENST00000345617 FUNDC2Q9BWH2 189 aa18.71■□□□□ 0.58
HDAC4-201ENST00000345617 XPNPEP1Q9NQW7 623 aa18.71■□□□□ 0.58
HDAC4-201ENST00000345617 DIRAS3O95661 229 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 SLC26A5P58743 744 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 PROX2Q3B8N5 592 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 CNN2Q99439 309 aaKnown RBP18.7■□□□□ 0.58
HDAC4-201ENST00000345617 HYKKA2RU49 373 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 SHOXO15266 292 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 MAGEA11P43364 429 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 PSMD8P48556 350 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 POLR2HP52434 150 aaKnown RBP18.7■□□□□ 0.58
HDAC4-201ENST00000345617 CREB5Q02930 508 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 PRAMEF14Q5SWL7 426 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 RNF128Q8TEB7 428 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 CNTNAP3BQ96NU0 1288 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 MCCC2Q9HCC0 563 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 ACOT13Q9NPJ3 140 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 OSER1Q9NX31 292 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 C9JVG2 144 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 OAS1P00973 400 aaKnown RBP18.7■□□□□ 0.58
HDAC4-201ENST00000345617 CD3GP09693 182 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 NR4A2P43354 598 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 CCDC71LQ8N9Z2 235 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 AUTS2Q8WXX7 1259 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 FUBP3Q96I24 572 aaKnown RBP eCLIP18.7■□□□□ 0.586e-8■■■■■ 32.5
HDAC4-201ENST00000345617 MSRAQ9UJ68 235 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 CPQQ9Y646 472 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 MS4A15Q8N5U1 240 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 NFKBIDQ8NI38 313 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 JOSD2Q8TAC2 188 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 ZDHHC3Q9NYG2 299 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 RPP14O95059 124 aaKnown RBP18.7■□□□□ 0.58
HDAC4-201ENST00000345617 POGLUT1Q8NBL1 392 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 SLC7A13Q8TCU3 470 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 SPIN2AQ99865 258 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 SPIN2BQ9BPZ2 258 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 FBXL3Q9UKT7 428 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 AMY2BP19961 511 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 RAB3BP20337 219 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 SELENOVP59797 346 aa18.7■□□□□ 0.58
HDAC4-201ENST00000345617 SCGB2A2Q13296 93 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms