RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 NRF1Q16656 503 aa12.91□□□□□ -0.34
CDC42-202ENST00000344548 EPHX4Q8IUS5 362 aa12.91□□□□□ -0.34
CDC42-202ENST00000344548 ZZZ3Q8IYH5 903 aa12.91□□□□□ -0.34
CDC42-202ENST00000344548 CAMKK1Q8N5S9 505 aa12.91□□□□□ -0.34
CDC42-202ENST00000344548 ICA1LQ8NDH6 482 aa12.91□□□□□ -0.34
CDC42-202ENST00000344548 LMX1AQ8TE12 382 aa12.91□□□□□ -0.34
CDC42-202ENST00000344548 STARD8Q92502 1023 aa12.91□□□□□ -0.34
CDC42-202ENST00000344548 RNF145Q96MT1 663 aa12.91□□□□□ -0.34
CDC42-202ENST00000344548 TRIM15Q9C019 465 aa12.91□□□□□ -0.34
CDC42-202ENST00000344548 AGPAT4Q9NRZ5 378 aa12.91□□□□□ -0.34
CDC42-202ENST00000344548 ANAPC2Q9UJX6 822 aa12.91□□□□□ -0.34
CDC42-202ENST00000344548 ATG4BQ9Y4P1 393 aa12.91□□□□□ -0.34
CDC42-202ENST00000344548 PCDH15Q96QU1 1955 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 KIR2DS5A0A0G2JLQ3 304 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 A0A0G2JNG1 304 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 C7orf72A4D263 438 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 KIR2DS3K7RE56 304 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 PDLIM1O00151 329 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 PGRMC2O15173 223 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 KDM1AO60341 852 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 B4GALT2O60909 372 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 PRKD3O94806 890 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 SERPINB1P30740 379 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 NUDT1P36639 197 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 RPS9P46781 194 aaKnown RBP12.9□□□□□ -0.34
CDC42-202ENST00000344548 CRYBA2P53672 197 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 SRSF5Q13243 272 aaKnown RBP12.9□□□□□ -0.34
CDC42-202ENST00000344548 KIR2DS5Q14953 304 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 ZNF750Q32MQ0 723 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 AASDHQ4L235 1098 aaPredicted RBP12.9□□□□□ -0.34
CDC42-202ENST00000344548 ANXA8L1Q5VT79 327 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 FIGLAQ6QHK4 219 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 TMEM26Q6ZUK4 368 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 GJD3Q8N144 294 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 ACOT4Q8N9L9 421 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 PAPD5Q8NDF8 572 aaKnown RBP12.9□□□□□ -0.34
CDC42-202ENST00000344548 GOT1L1Q8NHS2 421 aaPredicted RBP12.9□□□□□ -0.34
CDC42-202ENST00000344548 EXOSC8Q96B26 276 aaKnown RBP12.9□□□□□ -0.34
CDC42-202ENST00000344548 REXO5Q96IC2 774 aaKnown RBP12.9□□□□□ -0.34
CDC42-202ENST00000344548 NECAB3Q96P71 396 aaPredicted RBP12.9□□□□□ -0.34
CDC42-202ENST00000344548 CHID1Q9BWS9 393 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 CXorf36Q9H7Y0 433 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 RAPGEFL1Q9UHV5 662 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 PILRAQ9UKJ1 303 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 PCDHGB4Q9UN71 923 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 MRPS2Q9Y399 296 aaKnown RBP12.9□□□□□ -0.34
CDC42-202ENST00000344548 PCDHGB5Q9Y5G0 923 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 CABIN1Q9Y6J0 2220 aa12.9□□□□□ -0.34
CDC42-202ENST00000344548 A0A1W2PR48 441 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 A0A1W2PRB8 838 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 GSTA4O15217 222 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 CASC3O15234 703 aaKnown RBP12.9□□□□□ -0.35
CDC42-202ENST00000344548 TNFSF14O43557 240 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 PEX1O43933 1283 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 GPIP06744 558 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 FAM58BPP0C7Q3 252 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 ZCCHC18P0CG32 403 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 HIST1H1TP22492 207 aaPredicted RBP12.9□□□□□ -0.35
CDC42-202ENST00000344548 ATP5A1P25705 553 aaKnown RBP12.9□□□□□ -0.35
CDC42-202ENST00000344548 BLKP51451 505 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 DUSP2Q05923 314 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 SLAMF1Q13291 335 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 RGNQ15493 299 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 SLC5A12Q1EHB4 618 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 SWT1Q5T5J6 900 aaKnown RBP12.9□□□□□ -0.35
CDC42-202ENST00000344548 NDUFAF5Q5TEU4 345 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 C18orf63Q68DL7 685 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 SPESP1Q6UW49 350 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 IKBIPQ70UQ0 350 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 PAGE2Q7Z2X7 111 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 R3HCC1LQ7Z5L2 792 aaKnown RBP12.9□□□□□ -0.35
CDC42-202ENST00000344548 SERPINA11Q86U17 422 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.9□□□□□ -0.35
CDC42-202ENST00000344548 VPS37AQ8NEZ2 397 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 TTLQ8NG68 377 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 OR2L5Q8NG80 312 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 ASB4Q9Y574 426 aa12.9□□□□□ -0.35
CDC42-202ENST00000344548 WDR87Q6ZQQ6 2873 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 SPTBP11277 2137 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 SAC3D1A6NKF1 404 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 EVPLLA8MZ36 301 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 SOCS2O14508 198 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 GCM2O75603 506 aaPredicted RBP12.89□□□□□ -0.35
CDC42-202ENST00000344548 CCNDBP1O95273 360 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 SERPINA1P01009 418 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 ETFAP13804 333 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 DEFB133Q30KQ1 61 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 CWF19L1Q69YN2 538 aaKnown RBP12.89□□□□□ -0.35
CDC42-202ENST00000344548 MRM1Q6IN84 353 aaKnown RBP12.89□□□□□ -0.35
CDC42-202ENST00000344548 UBALD2Q8IYN6 164 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 NCLNQ969V3 563 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 EME1Q96AY2 570 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 SLC22A18Q96BI1 424 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 TM4SF19Q96DZ7 209 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 MTERF3Q96E29 417 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 SLC35A5Q9BS91 424 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 FAM60AQ9NP50 221 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 ATAD3AQ9NVI7 634 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 FBXW2Q9UKT8 454 aa12.89□□□□□ -0.35
CDC42-202ENST00000344548 VPS4AQ9UN37 437 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms