RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 GRIK2Q13002 908 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 IRF5Q13568 498 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 RGMBQ6NW40 437 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 FBXL22Q6P050 247 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 TMCO2Q7Z6W1 182 aaPredicted RBP11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 NPAS3Q8IXF0 933 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 SMG9Q9H0W8 520 aaKnown RBP11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 OR10A4Q9H209 315 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 PAK1IP1Q9NWT1 392 aaPredicted RBP11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 BCAS2O75934 225 aaPredicted RBP11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 GLP1RP43220 463 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 COL28A1Q2UY09 1125 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 CCDC116Q8IYX3 515 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 NIPA2Q8N8Q9 360 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 KREMEN2Q8NCW0 462 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 WDR20Q8TBZ3 569 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 P2RY13Q9BPV8 354 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 ZNF225Q9UK10 706 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 SARDHQ9UL12 918 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 IRAK2O43187 625 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 HSD3B1P14060 373 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 HADHBP55084 474 aaKnown RBP11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 ASTE1Q2TB18 679 aaPredicted RBP11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 TMEM69Q5SWH9 247 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 TTLL10Q6ZVT0 673 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 FBXL18Q96ME1 805 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 PTBP2Q9UKA9 531 aaKnown RBP11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 HS3ST4Q9Y661 456 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 SOWAHBA6NEL2 793 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 AGAP5A6NIR3 686 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 POP7O75817 140 aaKnown RBP11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 RPL35P42766 123 aaKnown RBP11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 KANK2Q63ZY3 851 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 CEACAM19Q7Z692 300 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 TMEM68Q96MH6 324 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 ADAMTS6Q9UKP5 1117 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 IGLV3-22A0A075B6J6 115 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 ZNF860A6NHJ4 632 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 TNFP01375 233 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 GP1BBP13224 206 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 RAB15P59190 212 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 GINS1Q14691 196 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 PON2Q15165 354 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 ARHGAP40Q5TG30 622 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 C7orf61Q8IZ16 206 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 BOLLQ8N9W6 283 aaKnown RBP11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 SLC35B2Q8TB61 432 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 NSUN5Q96P11 429 aaKnown RBP11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 PFDN5Q99471 154 aa11.74□□□□□ -0.53
SEMA6A-202ENST00000343348 LMTK2Q8IWU2 1503 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 CHRFAM7AQ494W8 412 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 ZNF678Q5SXM1 525 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 ZSCAN1Q8NBB4 408 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 ZDHHC1Q8WTX9 485 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 C17orf62Q9BQA9 187 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 PPIL3Q9H2H8 161 aaKnown RBP11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 NLGN3Q9NZ94 848 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 MICAL3Q7RTP6 2002 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 TEX13CA0A0J9YWL9 993 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 ARSFP54793 590 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 LRRTM4Q86VH4 590 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 CLEC4DQ8WXI8 215 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 PSKH2Q96QS6 385 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 EPYCQ99645 322 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 MAFKO60675 156 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 SLC18A1P54219 525 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 TXNDC5Q8NBS9 432 aaKnown RBP11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 TMIEQ8NEW7 156 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 THAP3Q8WTV1 239 aaPredicted RBP11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 CREB3L1Q96BA8 519 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 OR2B3O76000 313 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 H2AFB2P0C5Z0 115 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 AKR1C4P17516 323 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 F8A1P23610 371 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 OGDHQ02218 1023 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 NNATQ16517 81 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 BATFQ16520 125 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 HSD17B12Q53GQ0 312 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 NANOGP8Q6NSW7 305 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 TMEM156Q8N614 296 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 ASCC1Q8N9N2 400 aaKnown RBP11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 TWNKQ96RR1 684 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 C1orf21Q9H246 121 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 NANOGQ9H9S0 305 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 ERVK-19Q9WJR5 959 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 DLGAP4Q9Y2H0 992 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 PCDHGB2Q9Y5G2 931 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 KIAA1210Q9ULL0 1709 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 SOCS2O14508 198 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 RFPL1O75677 317 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 ASRGL1Q7L266 308 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 CMKLR1Q99788 373 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 SSX3Q99909 188 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 RAB11FIP5Q9BXF6 653 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 CD244Q9BZW8 370 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 TAS2R9Q9NYW1 312 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 REV1Q9UBZ9 1251 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 HCN4Q9Y3Q4 1203 aa11.73□□□□□ -0.53
SEMA6A-202ENST00000343348 PSAT1Q9Y617 370 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms