RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 PIKFYVEQ9Y2I7 2098 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 PCDH17O14917 1159 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 MYL12BO14950 172 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 SMAD6O43541 496 aaKnown RBP9.26□□□□□ -0.93
HOXA1-201ENST00000343060 OAZ2O95190 189 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 CKMT1AP12532 417 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 JUPP14923 745 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 CPEP16870 476 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 MYL12AP19105 171 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 AOAHP28039 575 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 HLA-FP30511 346 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 ZXDBP98169 803 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 TAGLNQ01995 201 aaKnown RBP9.26□□□□□ -0.93
HOXA1-201ENST00000343060 EEF1A2Q05639 463 aaKnown RBP9.26□□□□□ -0.93
HOXA1-201ENST00000343060 LRRC74AQ0VAA2 488 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 PYDC2Q56P42 97 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 C12orf73Q69YU5 71 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 MZT2BQ6NZ67 158 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 FAM151BQ6UXP7 276 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 NPAS3Q8IXF0 933 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 NAGSQ8N159 534 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 FBXL6Q8N531 539 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 C2orf69Q8N8R5 385 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 AQP11Q8NBQ7 271 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 UPRTQ96BW1 309 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 HYLS1Q96M11 299 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 DCLRE1CQ96SD1 692 aaKnown RBP9.26□□□□□ -0.93
HOXA1-201ENST00000343060 SPON2Q9BUD6 331 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 ABCG8Q9H221 673 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 GPATCH2Q9NW75 528 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 KCTD5Q9NXV2 234 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 MRPL39Q9NYK5 338 aaKnown RBP9.26□□□□□ -0.93
HOXA1-201ENST00000343060 GLTPQ9NZD2 209 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 ZNF282Q9UDV7 671 aaPredicted RBP9.26□□□□□ -0.93
HOXA1-201ENST00000343060 SLC23A1Q9UHI7 598 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 RUVBL1Q9Y265 456 aaKnown RBP9.26□□□□□ -0.93
HOXA1-201ENST00000343060 F8W810 466 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 TLR4O00206 839 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 PLD2O14939 933 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 PDPK1O15530 556 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 ACSL4O60488 711 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 CD160O95971 181 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 OPN1SWP03999 348 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 PSKH1P11801 424 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 NAGAP17050 411 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 ITGALP20701 1170 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 PPP3R1P63098 170 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 ZNF91Q05481 1191 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 DGKKQ5KSL6 1271 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 ANXA8L1Q5VT79 327 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 FAM92BQ6ZTR7 304 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 GPR142Q7Z601 462 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 CLDN19Q8N6F1 224 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 GOT1L1Q8NHS2 421 aaPredicted RBP9.26□□□□□ -0.93
HOXA1-201ENST00000343060 AP3S1Q92572 193 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 GTPBP3Q969Y2 492 aaKnown RBP9.26□□□□□ -0.93
HOXA1-201ENST00000343060 ZBED6CLQ96FA7 236 aaPredicted RBP9.26□□□□□ -0.93
HOXA1-201ENST00000343060 COPS8Q99627 209 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 KCNJ15Q99712 375 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 GPR63Q9BZJ6 419 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 POLR2J2Q9GZM3 115 aaKnown RBP9.26□□□□□ -0.93
HOXA1-201ENST00000343060 TMEM38AQ9H6F2 299 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 NMNAT1Q9HAN9 279 aaPredicted RBP9.26□□□□□ -0.93
HOXA1-201ENST00000343060 SPATA6Q9NWH7 488 aaPredicted RBP9.26□□□□□ -0.93
HOXA1-201ENST00000343060 LHX3Q9UBR4 397 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 REV1Q9UBZ9 1251 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 PHF11Q9UIL8 331 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 TMCC3Q9ULS5 477 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 HSPB11Q9Y547 144 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 ZFP37Q9Y6Q3 630 aaPredicted RBP9.26□□□□□ -0.93
HOXA1-201ENST00000343060 ENPP4Q9Y6X5 453 aa9.26□□□□□ -0.93
HOXA1-201ENST00000343060 J3KTA2 159 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 SGK494L7N484 410 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 M0QZ92 97 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 MEN1O00255 615 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 WWP2O00308 870 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 STK25O00506 426 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 RECKO95980 971 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 ADAP00813 363 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 CLEC2LP0C7M8 214 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 ZDHHC11BP0C7U3 371 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 ARSBP15848 533 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 CTRB1P17538 263 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 GRK4P32298 578 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 GJA5P36382 358 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 RPIAP49247 311 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 SNRPD2P62316 118 aaKnown RBP9.25□□□□□ -0.93
HOXA1-201ENST00000343060 ANGPT1Q15389 498 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 CRB2Q5IJ48 1285 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 GCNT6Q5T4J0 391 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 CTRB2Q6GPI1 263 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 ZNF730Q6ZMV8 503 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 MOB2Q70IA6 237 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 AMIGO1Q86WK6 493 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 FAM217AQ8IXS0 508 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 SLC34A3Q8N130 599 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 GPC2Q8N158 579 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 ATP6V1C2Q8NEY4 427 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 NPLOC4Q8TAT6 608 aa9.25□□□□□ -0.93
HOXA1-201ENST00000343060 B3GALT6Q96L58 329 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms