RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 I6L893 689 aaPredicted RBP6.91□□□□□ -1.3
VCAN-202ENST00000342785 E2F3O00716 465 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 KMOO15229 486 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 B3GALT2O43825 422 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 PRAMEF12O95522 483 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 CCR7P32248 378 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 CDK5R2Q13319 367 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 SELPLGQ14242 412 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 SUZ12Q15022 739 aaKnown RBP6.91□□□□□ -1.3
VCAN-202ENST00000342785 ZNF551Q7Z340 670 aaPredicted RBP6.91□□□□□ -1.3
VCAN-202ENST00000342785 NAGSQ8N159 534 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 GAB3Q8WWW8 586 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 SGIP1Q9BQI5 828 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 SLC30A2Q9BRI3 323 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 LINC00597Q9H2U6 94 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 TNFRSF10DQ9UBN6 386 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 SESN1Q9Y6P5 492 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 NUMBLQ9Y6R0 609 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 SMIM30A4D0T7 59 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 E7EQ34 232 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 LCKP06239 509 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 CCL5P13501 91 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 IGFBP4P22692 258 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 UQCRC2P22695 453 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 MINDY4Q4G0A6 757 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 POMZP3Q6PJE2 187 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 ERN2Q76MJ5 926 aaKnown RBP6.91□□□□□ -1.3
VCAN-202ENST00000342785 SPARTQ8N0X7 666 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 RDH14Q9HBH5 336 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 SEC14L4Q9UDX3 406 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 GNB5O14775 395 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 LSM1O15116 133 aaKnown RBP6.91□□□□□ -1.3
VCAN-202ENST00000342785 ORC5O43913 435 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 CD9P21926 228 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 NDUFS1P28331 727 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 DPP6P42658 865 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 ARL9Q6T311 187 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 ENPP7Q6UWV6 458 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 IKBIPQ70UQ0 350 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 TMC8Q8IU68 726 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 ZNF563Q8TA94 476 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 TUBB1Q9H4B7 451 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 TIGARQ9NQ88 270 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 SLX4Q8IY92 1834 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 MAGEB3O15480 346 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 ARHGEF15O94989 841 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 APOL3O95236 402 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 CKMT1AP12532 417 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 TNFRSF1BP20333 461 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 ELAVL3Q14576 367 aaKnown RBP6.91□□□□□ -1.3
VCAN-202ENST00000342785 CTSL3PQ5NE16 218 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 MANEALQ5VSG8 457 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 C6orf120Q7Z4R8 191 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 OAFQ86UD1 273 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 CDH24Q86UP0 819 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 ZNF248Q8NDW4 579 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 OR4E2Q8NGC2 313 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 ZNF689Q96CS4 500 aaPredicted RBP6.91□□□□□ -1.3
VCAN-202ENST00000342785 SIPA1Q96FS4 1042 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 BARD1Q99728 777 aaKnown RBP6.91□□□□□ -1.3
VCAN-202ENST00000342785 HERC2P3Q9BVR0 1158 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 GORASP2Q9H8Y8 452 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 MOV10Q9HCE1 1003 aaKnown RBP6.91□□□□□ -1.3
VCAN-202ENST00000342785 FBXL12Q9NXK8 326 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 CD300AQ9UGN4 299 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 GMEB1Q9Y692 573 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 FAM92AA1XBS5 289 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 SLC25A12O75746 678 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 SLC13A2Q13183 592 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 IDNKQ5T6J7 187 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 CCDC116Q8IYX3 515 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 GPR135Q8IZ08 494 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 KLHL36Q8N4N3 616 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 OR56A1Q8NGH5 318 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 CITED4Q96RK1 184 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 AASSQ9UDR5 926 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 WDR45Q9Y484 360 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 IRAK3Q9Y616 596 aa6.91□□□□□ -1.3
VCAN-202ENST00000342785 TNRC6CQ9HCJ0 1690 aaKnown RBP6.9□□□□□ -1.3
VCAN-202ENST00000342785 FAM47E-STBD1D6RA91 191 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 TGM5O43548 720 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 CTSOP43234 321 aaPredicted RBP6.9□□□□□ -1.3
VCAN-202ENST00000342785 BTN3A2P78410 334 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 VEZF1Q14119 521 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 HSF5Q4G112 596 aaPredicted RBP6.9□□□□□ -1.3
VCAN-202ENST00000342785 NHSL2Q5HYW2 709 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 SCAIQ8N9R8 606 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 TMEM80Q96HE8 168 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 NAA50Q9GZZ1 169 aaKnown RBP6.9□□□□□ -1.3
VCAN-202ENST00000342785 SLC22A4Q9H015 551 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 KATNBL1Q9H079 304 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 TLR9Q9NR96 1032 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 PCDHGB5Q9Y5G0 923 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 PCDHA9Q9Y5H5 950 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 BRWD1Q9NSI6 2320 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 MYH4Q9Y623 1939 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 IGLV3-10A0A075B6K4 115 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 SCAMP2O15127 329 aaKnown RBP6.9□□□□□ -1.3
VCAN-202ENST00000342785 NDUFB5O43674 189 aa6.9□□□□□ -1.3
VCAN-202ENST00000342785 CELP19835 753 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms