RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 GPR87Q9BY21 358 aa12.48□□□□□ -0.41
TUBD1-202ENST00000340993 PITHD1Q9GZP4 211 aaPredicted RBP12.48□□□□□ -0.41
TUBD1-202ENST00000340993 SSU72Q9NP77 194 aaKnown RBP12.48□□□□□ -0.41
TUBD1-202ENST00000340993 BSNQ9UPA5 3926 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 A6NL46 340 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 IDSB3KWA1 339 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 H0YIG0 161 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 PSMD12O00232 456 aaPredicted RBP12.47□□□□□ -0.41
TUBD1-202ENST00000340993 ULK1O75385 1050 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 SKAP2O75563 359 aaPredicted RBP12.47□□□□□ -0.41
TUBD1-202ENST00000340993 BMP10O95393 424 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 HSPA4LO95757 839 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 KRT6AP02538 564 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 KRT6BP04259 564 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 RAB40ALP0C0E4 278 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 MAOAP21397 527 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 KRT6CP48668 564 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 HNRNPFP52597 415 aaKnown RBP12.47□□□□□ -0.41
TUBD1-202ENST00000340993 EMP3P54852 163 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 PKNOX1P55347 436 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 BTG2P78543 158 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 ID2Q02363 134 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 AP5B1Q2VPB7 878 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 GGTA1PQ4G0N0 100 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 SPDYAQ5MJ70 313 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 ACOT4Q8N9L9 421 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 TMEM52Q8NDY8 209 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 CDC26Q8NHZ8 85 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 RGMAQ96B86 450 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 KCNC2Q96PR1 638 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 SH3GL2Q99962 352 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 MAPKAP1Q9BPZ7 522 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 CENPKQ9BS16 269 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 ACPTQ9BZG2 426 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 VN1R1Q9GZP7 353 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 VIPAS39Q9H9C1 493 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 MKKSQ9NPJ1 570 aaPredicted RBP12.47□□□□□ -0.41
TUBD1-202ENST00000340993 PRDM7Q9NQW5 492 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 DOCK10Q96BY6 2186 aa12.47□□□□□ -0.41
TUBD1-202ENST00000340993 SPENQ96T58 3664 aaKnown RBP12.46□□□□□ -0.41
TUBD1-202ENST00000340993 GLOD5A6NK44 160 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 KLK1P06870 262 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 SMIM10L1P0DMW3 83 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 ATP5A1P25705 553 aaKnown RBP12.46□□□□□ -0.41
TUBD1-202ENST00000340993 PTX3P26022 381 aaPredicted RBP12.46□□□□□ -0.41
TUBD1-202ENST00000340993 PIK3CBP42338 1070 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 EMP2P54851 167 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 MTTPP55157 894 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 PCDH1Q08174 1060 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 TGM3Q08188 693 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 ASPHQ12797 758 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 SLAMF1Q13291 335 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 IMPG1Q17R60 797 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 ADPRMQ3LIE5 342 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 OR4C11Q6IEV9 310 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 DDIASQ8IXT1 998 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 DOK4Q8TEW6 326 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 UCN3Q969E3 161 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 FKBP10Q96AY3 582 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 SMIM10Q96HG1 83 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 CNDP1Q96KN2 507 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 MAGEB10Q96LZ2 347 aaPredicted RBP12.46□□□□□ -0.41
TUBD1-202ENST00000340993 QRFPRQ96P65 431 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 C20orf27Q9GZN8 174 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 GIMAP2Q9UG22 337 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 MAN2B2Q9Y2E5 1009 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 IGSF10Q6WRI0 2623 aa12.46□□□□□ -0.41
TUBD1-202ENST00000340993 WASHC1A8K0Z3 465 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 A8MUA0 341 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 AZIN1O14977 448 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 TMPRSS11DO60235 418 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 ENO1P06733 434 aaKnown RBP12.46□□□□□ -0.42
TUBD1-202ENST00000340993 FHP07954 510 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 LINC00032P0C843 101 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 DHRS4L1P0CG22 281 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 HIST1H1TP22492 207 aaPredicted RBP12.46□□□□□ -0.42
TUBD1-202ENST00000340993 GSTM2P28161 218 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 UCNP55089 124 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 LIM2P55344 173 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 PPP1R32Q7Z5V6 425 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 MMP21Q8N119 569 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 C1orf52Q8N6N3 182 aaKnown RBP12.46□□□□□ -0.42
TUBD1-202ENST00000340993 TBC1D20Q96BZ9 403 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 APIPQ96GX9 242 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 SLC29A3Q9BZD2 475 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 ENAMQ9NRM1 1142 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 MARCOQ9UEW3 520 aaPredicted RBP12.46□□□□□ -0.42
TUBD1-202ENST00000340993 ZDHHC2Q9UIJ5 367 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 PCDHGA6Q9Y5G7 932 aa12.46□□□□□ -0.42
TUBD1-202ENST00000340993 CNTRLQ7Z7A1 2325 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 A0A088AWK7 358 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 VSTM2BA6NLU5 285 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 NPHS1O60500 1241 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 ALBP02768 609 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 SERPINE1P05121 402 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 KITP10721 976 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 RNH1P13489 461 aaKnown RBP12.45□□□□□ -0.42
TUBD1-202ENST00000340993 ZNF10P21506 573 aaPredicted RBP12.45□□□□□ -0.42
TUBD1-202ENST00000340993 SERPINB1P30740 379 aa12.45□□□□□ -0.42
TUBD1-202ENST00000340993 HNRNPH2P55795 449 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms