RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 FHL5Q5TD97 284 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 MED27Q6P2C8 311 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 TRMT10CQ7L0Y3 403 aaKnown RBP12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 LAS2Q8IYD9 372 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 CA13Q8N1Q1 262 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 SLC5A8Q8N695 610 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 SUN3Q8TAQ9 357 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 KCTD4Q8WVF5 259 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 MRRFQ96E11 262 aaKnown RBP12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 PTCHD1Q96NR3 888 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 SERINC2Q96SA4 455 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 PAFAH2Q99487 392 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 RBCK1Q9BYM8 510 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 COPS7BQ9H9Q2 264 aaPredicted RBP12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 ASF1BQ9NVP2 202 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 ZNF446Q9NWS9 450 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 STMN3Q9NZ72 180 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 ZNF490Q9ULM2 529 aaPredicted RBP12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 TSC22D4Q9Y3Q8 395 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 CSAG2Q9Y5P2 127 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 LRRK2Q5S007 2527 aa12.53□□□□□ -0.4
SIRPB3P-201ENST00000340424 IGKV3D-11A0A0A0MRZ8 115 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 IGHV3-20A0A0C4DH32 117 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 TCRBV16S1A1N1A0A5B0 115 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 BLACEA4D250 179 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 OR5H15A6NDH6 313 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 TCP11X1B4DZS4 312 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 PRAMEF4O60810 478 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 B4GALT2O60909 372 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 CELA2AP08217 269 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 RBP1P09455 135 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 MTHFD2P13995 350 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 GNLYP22749 145 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 ARFIP1P53367 373 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 MTTPP55157 894 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 HSD17B7P56937 341 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 RAB38P57729 211 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 SLC26A5P58743 744 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 IRF9Q00978 393 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 ZNF33BQ06732 778 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 ELOAQ14241 798 aaKnown RBP12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 PCBP2Q15366 365 aaKnown RBP eCLIP12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 MEP1AQ16819 746 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 FBXO48Q5FWF7 155 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 LGSNQ5TDP6 509 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 PRAMEF9Q5VWM5 478 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 LIPJQ5W064 366 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 GRHL2Q6ISB3 625 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 ABHD17CQ6PCB6 329 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 FAM180AQ6UWF9 173 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 CHSY3Q70JA7 882 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 VN1R5Q7Z5H4 357 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 ZNF595Q8IYB9 648 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 TSLPQ969D9 159 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 ESAMQ96AP7 390 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 C19orf60Q96EN9 201 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 QRFPRQ96P65 431 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 CENPKQ9BS16 269 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 TBCDQ9BTW9 1192 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 AICDAQ9GZX7 198 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 KCNK13Q9HB14 408 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 ANGPTL3Q9Y5C1 460 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 PCDHGB6Q9Y5F9 930 aa12.52□□□□□ -0.41
SIRPB3P-201ENST00000340424 SCN2AQ99250 2005 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 OR2W5A6NFC9 320 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 SAGE2PA6NJ88 616 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 C4orf51C9J302 202 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 WDPCPO95876 746 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 B3GALT4O96024 378 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 EDN3P14138 238 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 CD22P20273 847 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 PIK3CBP42338 1070 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 UQCRFS1P47985 274 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 PLA2G16P53816 162 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 PHEXP78562 749 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 PFKFB4Q16877 469 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 TECRLQ5HYJ1 363 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 ACER2Q5QJU3 275 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 SCUBE1Q8IWY4 988 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 SHISA5Q8N114 240 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 HORMAD2Q8N7B1 307 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 BCORP1Q8N888 145 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 ST6GALNAC3Q8NDV1 305 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 OR1N1Q8NGS0 311 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 ZNF473Q8WTR7 871 aaKnown RBP12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 REPS1Q96D71 796 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 MTBPQ96DY7 904 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 CMTM7Q96FZ5 175 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 GPR78Q96P69 363 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 PRR14Q9BWN1 585 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 MS4A8Q9BY19 250 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 VPS11Q9H270 941 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 LYRM4Q9HD34 91 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 DAPP1Q9UN19 280 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 ASB1Q9Y576 335 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 PCDHGA11Q9Y5H2 935 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 SPACA6W5XKT8 324 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 CNTRLQ7Z7A1 2325 aa12.51□□□□□ -0.41
SIRPB3P-201ENST00000340424 EXOC1LA0A1B0GW35 172 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms