RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 C22orf42Q6IC83 251 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 TMIGD1Q6UXZ0 262 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 PDZD3Q86UT5 571 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 SERINC5Q86VE9 423 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 ZNF567Q8N184 647 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 DUSP18Q8NEJ0 188 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 NETO1Q8TDF5 533 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 ADAMTS19Q8TE59 1207 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 GATAD2BQ8WXI9 593 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 UPF1Q92900 1129 aaKnown RBP eCLIP9.29□□□□□ -0.921e-6■■■■■ 32.5
PTCHD4-201ENST00000339488 C7orf50Q9BRJ6 194 aaKnown RBP9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 ZCCHC2Q9C0B9 1178 aaKnown RBP9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 HAPLN2Q9GZV7 340 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 RHOJQ9H4E5 214 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 METTL17Q9H7H0 456 aaPredicted RBP9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 CFAP97Q9P2B7 532 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 CLEC2DQ9UHP7 191 aa9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 CFAP20Q9Y6A4 193 aaKnown RBP9.29□□□□□ -0.92
PTCHD4-201ENST00000339488 ARGFXA6NJG6 315 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 CLCA1A8K7I4 914 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 G3V3Q6 166 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 LSM8O95777 96 aaKnown RBP9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 MT-CYBP00156 380 aaPredicted RBP9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 DHFRP00374 187 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 GOT1P17174 413 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 CXCL2P19875 107 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 TRHRP34981 398 aaPredicted RBP9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 RFC3P40938 356 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 SRP9P49458 86 aaKnown RBP9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 XKR9Q5GH70 373 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 TECRLQ5HYJ1 363 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 PCID2Q5JVF3 399 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 HECTD3Q5T447 861 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 TMEM91Q6ZNR0 172 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 KDELC2Q7Z4H8 507 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 DPPA2Q7Z7J5 298 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 LDLRAD3Q86YD5 345 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 ZDHHC21Q8IVQ6 265 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 SLC13A3Q8WWT9 602 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 ISG20Q96AZ6 181 aaKnown RBP9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 DNTTIP1Q9H147 329 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 HHATLQ9HCP6 504 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 DLL4Q9NR61 685 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 NDUFAF4Q9P032 175 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 SPASTQ9UBP0 616 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 AOC2O75106 756 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 SLC22A3O75751 556 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 C1QCP02747 245 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 MLNP12872 115 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 PRDX3P30048 256 aaKnown RBP9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 CTSOP43234 321 aaPredicted RBP9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 AVPR1BP47901 424 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 IFRD2Q12894 506 aaPredicted RBP9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 NPRL3Q12980 569 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 CBLBQ13191 982 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 GPR176Q14439 515 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 GUCA2BQ16661 112 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 TMEM44Q2T9K0 475 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 UNC50Q53HI1 259 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 FUT10Q6P4F1 479 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 SHFQ7M4L6 423 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 MILR1Q7Z6M3 343 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 B3GNT7Q8NFL0 401 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 OR1S1Q8NH92 325 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 CREB3L4Q8TEY5 395 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 AKT1S1Q96B36 256 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 FICDQ9BVA6 458 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 TEX12Q9BXU0 123 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 FAM212BQ9NTI7 297 aaPredicted RBP9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 WBP1LQ9NX94 342 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 SEC14L3Q9UDX4 400 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 PLEKHB1Q9UF11 243 aaPredicted RBP9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 SLC2A6Q9UGQ3 507 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 GPN3Q9UHW5 284 aaPredicted RBP9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 MRPL42Q9Y6G3 142 aaKnown RBP9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 RGPD3A6NKT7 1758 aaPredicted RBP9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 RGPD4Q7Z3J3 1758 aa9.28□□□□□ -0.92
PTCHD4-201ENST00000339488 LRIT2A6NDA9 550 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 CXorf65A6NEN9 183 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 M0QYV0 167 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 PRRG1O14668 218 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 SSNA1O43805 119 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 RASGRP1O95267 797 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 ADH1CP00326 375 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 SIM1P81133 766 aaPredicted RBP9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 DMP1Q13316 513 aaPredicted RBP9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 CAMK2GQ13555 558 aaPredicted RBP9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 LIPKQ5VXJ0 399 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 BICRALQ6AI39 1079 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 ELP2Q6IA86 826 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 PAQR6Q6TCH4 344 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 TMEM107Q6UX40 140 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 VTCN1Q7Z7D3 282 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 LDB1Q86U70 411 aaPredicted RBP9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 TMEM135Q86UB9 458 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 PIM3Q86V86 326 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 FAM126BQ8IXS8 530 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 C7orf31Q8N865 590 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 FAM181AQ8N9Y4 354 aa9.27□□□□□ -0.92
PTCHD4-201ENST00000339488 BPIFCQ8NFQ6 507 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms