RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ERI3O43414 337 aaKnown RBP7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 HCRTR1O43613 425 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 GPR37L1O60883 481 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 SCELO95171 688 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 RETP07949 1114 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 C8orf89P0DMQ9 161 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 MAGP20916 626 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 HTR1BP28222 390 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 HSD17B2P37059 387 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 YAP1P46937 504 aaKnown RBP7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 OR1E2P47887 323 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 DUSP2Q05923 314 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 MERTKQ12866 999 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 HSPB3Q12988 150 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 SMAD4Q13485 552 aaKnown RBP7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 GPR18Q14330 331 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 C18orf63Q68DL7 685 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 GPR153Q6NV75 609 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 CEP68Q76N32 757 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 SATL1Q86VE3 508 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 ZNF687Q8N1G0 1237 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 SYNPOQ8N3V7 929 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 VPS37AQ8NEZ2 397 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 UBE2E3Q969T4 207 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 BDH2Q9BUT1 245 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 ADI1Q9BV57 179 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 OSBPL11Q9BXB4 747 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 BHLHE41Q9C0J9 482 aaPredicted RBP7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 VCXQ9H320 206 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 FBRSQ9HAH7 460 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 PRDM6Q9NQX0 595 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 SIRT5Q9NXA8 310 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 SPATA7Q9P0W8 599 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 APOBEC3BQ9UH17 382 aaKnown RBP7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 ATG4BQ9Y4P1 393 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 PRAMEF25A6NGN4 478 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 CAPN5O15484 640 aaPredicted RBP7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 B4GAT1O43505 415 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 CTSVO60911 334 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 CTSBP07858 339 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 SRFP11831 508 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 SOAT1P35610 550 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 PIGAP37287 484 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 RPS9P46781 194 aaKnown RBP7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 LSSP48449 732 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 ARSFP54793 590 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 KIAA1024LP59773 190 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 EIF2B5Q13144 721 aaKnown RBP7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 TDGQ13569 410 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 UBXN2BQ14CS0 331 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 FBXO43Q4G163 708 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 PRRT3Q5FWE3 981 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 TMTC4Q5T4D3 741 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 OR4C11Q6IEV9 310 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 FBXO42Q6P3S6 717 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 SPESP1Q6UW49 350 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 MSANTD1Q6ZTZ1 278 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 TSEN54Q7Z6J9 526 aaKnown RBP7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 HMGN2P46Q86SG4 172 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 SLC44A2Q8IWA5 706 aaPredicted RBP7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 ZC3H7AQ8IWR0 971 aaKnown RBP7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 METTL25Q8N6Q8 603 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 DNAJB8Q8NHS0 232 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 FLVCR1-AS1Q8TAF5 88 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 DOK4Q8TEW6 326 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 RAB8BQ92930 207 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 MS4A6EQ96DS6 147 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 MAGED4Q96JG8 741 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 ORAI3Q9BRQ5 295 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 C9orf16Q9BUW7 83 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 UGT2B28Q9BY64 529 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 PCBD2Q9H0N5 130 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 SRMSQ9H3Y6 488 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 KIR3DX1Q9H7L2 352 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 MVB12BQ9H7P6 319 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 TMEM184CQ9NVA4 438 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 WSB2Q9NYS7 404 aaPredicted RBP7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 TAS2R9Q9NYW1 312 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 AASSQ9UDR5 926 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 ZNF639Q9UID6 485 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 FBXW2Q9UKT8 454 aa7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 FAF1Q9UNN5 650 aaPredicted RBP7.04□□□□□ -1.28
SRFBP1-201ENST00000339397 SPAG17Q6Q759 2223 aa7.03□□□□□ -1.28
SRFBP1-201ENST00000339397 LOC105369274A0A096LPK9 316 aa7.03□□□□□ -1.28
SRFBP1-201ENST00000339397 LOC102723532A0A0G2JNH3 316 aa7.03□□□□□ -1.28
SRFBP1-201ENST00000339397 OR6C74A6NCV1 312 aa7.03□□□□□ -1.28
SRFBP1-201ENST00000339397 G3V2T6 193 aa7.03□□□□□ -1.28
SRFBP1-201ENST00000339397 GNGT2O14610 69 aa7.03□□□□□ -1.28
SRFBP1-201ENST00000339397 CCNDBP1O95273 360 aa7.03□□□□□ -1.28
SRFBP1-201ENST00000339397 FKBP9O95302 570 aa7.03□□□□□ -1.28
SRFBP1-201ENST00000339397 APBB3O95704 486 aa7.03□□□□□ -1.28
SRFBP1-201ENST00000339397 ALPLP05186 524 aa7.03□□□□□ -1.28
SRFBP1-201ENST00000339397 TFAP2AP05549 437 aa7.03□□□□□ -1.28
SRFBP1-201ENST00000339397 F3P13726 295 aa7.03□□□□□ -1.28
SRFBP1-201ENST00000339397 DDCP20711 480 aa7.03□□□□□ -1.28
SRFBP1-201ENST00000339397 CXCR2P25025 360 aa7.03□□□□□ -1.28
SRFBP1-201ENST00000339397 CERS1P27544 350 aa7.03□□□□□ -1.28
SRFBP1-201ENST00000339397 AKT2P31751 481 aa7.03□□□□□ -1.28
SRFBP1-201ENST00000339397 SSR2P43308 183 aa7.03□□□□□ -1.28
SRFBP1-201ENST00000339397 CDK9P50750 372 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms