RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 PDE7BQ9NP56 450 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MIEF1Q9NQG6 463 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 FAM120CQ9NX05 1096 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 TEX10Q9NXF1 929 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 TMEM181Q9P2C4 612 aa14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 WBP11Q9Y2W2 641 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MRPS2Q9Y399 296 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ZSCAN9O15535 394 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ZBTB11O95625 1053 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SLC6A2P23975 617 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ALDH9A1P49189 494 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SEPHS1P49903 392 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 TRA2BP62995 288 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 HEPACAMQ14CZ8 416 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SUZ12Q15022 739 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PRSS53Q2L4Q9 553 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 WASHC2DQ5SRD0 308 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MRM1Q6IN84 353 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 NANOGP8Q6NSW7 305 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PRMT9Q6P2P2 845 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PRR23CQ6ZRP0 262 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MSANTD1Q6ZTZ1 278 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ABHD13Q7L211 337 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 TICAM1Q8IUC6 712 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CLECL1Q8IZS7 167 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CCDC124Q96CT7 223 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MTERF3Q96E29 417 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CGREF1Q99674 301 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 NUDT22Q9BRQ3 303 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 NLNQ9BYT8 704 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 KCNH6Q9H252 994 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 DENND2DQ9H6A0 471 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 NANOGQ9H9S0 305 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 FBXW2Q9UKT8 454 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MAN2B2Q9Y2E5 1009 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ASB4Q9Y574 426 aa14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MN1Q10571 1320 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-201ENST00000338399 LNP1A1A4G5 178 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 A8MU76 341 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CIB2O75838 187 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CPSF4O95639 269 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 GSNP06396 782 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SPTBP11277 2137 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 DDCP20711 480 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MSX2P35548 267 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CDKN2CP42773 168 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 GSTM5P46439 218 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 GABRA4P48169 554 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 DAB2P98082 770 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MUM1Q2TAK8 710 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 DEFB134Q4QY38 66 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MANEAQ5SRI9 462 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 LAIR1Q6GTX8 287 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 TMEM214Q6NUQ4 689 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 WDR74Q6RFH5 385 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SLC15A3Q8IY34 581 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 WDR60Q8WVS4 1066 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 UCN3Q969E3 161 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 TMEM125Q96AQ2 219 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 BHLHE41Q9C0J9 482 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PAIP1Q9H074 479 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SLC6A13Q9NSD5 602 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ATAD3AQ9NVI7 634 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CMTM6Q9NX76 183 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 VAPAQ9P0L0 249 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ATXN7L1Q9ULK2 861 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ATG4BQ9Y4P1 393 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PCDHB14Q9Y5E9 798 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PCDHA9Q9Y5H5 950 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 A0A096LPI6 279 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PRSS51A0A1B0GVH4 220 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 NME4O00746 187 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 RFXANKO14593 260 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SRPX2O60687 465 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ERN1O75460 977 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SCELO95171 688 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ALOX12P18054 663 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 TCN1P20061 433 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CCL7P80098 99 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MPEG1Q2M385 716 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PROX2Q3B8N5 592 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 GTDC1Q4AE62 458 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 RABL3Q5HYI8 236 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 NDUFAF5Q5TEU4 345 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ANXA8L1Q5VT79 327 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 FAM180BQ6P0A1 224 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CARFQ8N187 725 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 FAM156AQ8NDB6 213 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 VPS37AQ8NEZ2 397 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 NAT6Q93015 286 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CIDECQ96AQ7 238 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 MAPKAP1Q9BPZ7 522 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ROGDIQ9GZN7 287 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 CHRNA10Q9GZZ6 450 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SLC25A37Q9NYZ2 338 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 C5AR2Q9P296 337 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ABCD2Q9UBJ2 740 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PLCL2Q9UPR0 1127 aa13.99□□□□□ -0.17
CDK5RAP3-201ENST00000338399 NEUROG3Q9Y4Z2 214 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms