RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ZGLP1P0C6A0 271 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 F8A1P23610 371 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 TLX1P31314 330 aaPredicted RBP11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 BSGP35613 385 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 XCR1P46094 333 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 HTR6P50406 440 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 EMP2P54851 167 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 SNRPNP63162 240 aaKnown RBP11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 OLR1P78380 273 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 BTKQ06187 659 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 RUNX2Q13950 521 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 SSPNQ14714 243 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 SYT16Q17RD7 645 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 UGT3A2Q3SY77 523 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 TUBB8Q3ZCM7 444 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 VWA2Q5GFL6 755 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 CCNYL2Q5T2Q4 361 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 RNF165Q6ZSG1 346 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 NUDT13Q86X67 352 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 DDIASQ8IXT1 998 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 METTL4Q8N3J2 472 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 ZCCHC7Q8N3Z6 543 aaKnown RBP11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 OR5T3Q8NGG3 340 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 OR2Y1Q8NGV0 311 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 AGR3Q8TD06 166 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 ADAMTS18Q8TE60 1221 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 CHTF18Q8WVB6 975 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 TBC1D20Q96BZ9 403 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 PEX11GQ96HA9 241 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 METTL2AQ96IZ6 378 aaKnown RBP11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 VPS50Q96JG6 964 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 OR1F2PQ96R84 312 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 HBEGFQ99075 208 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 ACTL8Q9H568 366 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 ZNF395Q9H8N7 513 aaPredicted RBP11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 LYRM4Q9HD34 91 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 TNFRSF12AQ9NP84 129 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 MS4A12Q9NXJ0 267 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 MRPS33Q9Y291 106 aaKnown RBP11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 DNAJC15Q9Y5T4 150 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 HEATR5BQ9P2D3 2071 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 SLCO1B7G3V0H7 640 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 DNAJB6O75190 326 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 SNNO75324 88 aaPredicted RBP11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 SEC22BO75396 215 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 SNRNP200O75643 2136 aaKnown RBP11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 KLF7O75840 302 aaPredicted RBP11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 SCELO95171 688 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 KLK1P06870 262 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 LINC00032P0C843 101 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 JAK1P23458 1154 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 CERS1P27544 350 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 ARRB2P32121 409 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 LIM2P55344 173 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 RAB38P57729 211 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 HMGCS1Q01581 520 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 TLE3Q04726 772 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 ACSM2AQ08AH3 577 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 SPIN4Q56A73 249 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 MFSD4BQ5TF39 518 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 CES4AQ5XG92 561 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 ACSM2BQ68CK6 577 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 GPR180Q86V85 440 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 CRLF3Q8IUI8 442 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 PRSS58Q8IYP2 241 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 CA13Q8N1Q1 262 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 ZNF781Q8N8C0 355 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 C7orf57Q8NEG2 295 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 TWIST2Q8WVJ9 160 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 CKAP2Q8WWK9 683 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 METTL21AQ8WXB1 218 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 STARD8Q92502 1023 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 NACC2Q96BF6 587 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 MAGEB18Q96M61 343 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 CNTNAP3BQ96NU0 1288 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 IP6K3Q96PC2 410 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 SORT1Q99523 831 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 CRB3Q9BUF7 120 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 SORBS1Q9BX66 1292 aaKnown RBP11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 MRPL1Q9BYD6 325 aaKnown RBP11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 CNTNAP3Q9BZ76 1288 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 ACPTQ9BZG2 426 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 C20orf27Q9GZN8 174 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 SOX17Q9H6I2 414 aaPredicted RBP11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 SEMA3GQ9NS98 782 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 RIC8BQ9NVN3 520 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 LYARQ9NX58 379 aaKnown RBP11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 CTSFQ9UBX1 484 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 PHF11Q9UIL8 331 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 HAO1Q9UJM8 370 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 MKL2Q9ULH7 1088 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 ZMIZ1Q9ULJ6 1067 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 DAPP1Q9UN19 280 aa11.25□□□□□ -0.61
SPTLC1-202ENST00000337841 BLACEA4D250 179 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 TMEM233B4DJY2 109 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 C4orf51C9J302 202 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 PEX12O00623 359 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 PCDH17O14917 1159 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 EFSO43281 561 aa11.24□□□□□ -0.61
SPTLC1-202ENST00000337841 B4GALT2O60909 372 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms