RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 FBXW2Q9UKT8 454 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 RAB23Q9ULC3 237 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 MAN2B2Q9Y2E5 1009 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 WBP11Q9Y2W2 641 aaKnown RBP13.96□□□□□ -0.17
CBX3-201ENST00000337620 PCDHA9Q9Y5H5 950 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 PCDH15Q96QU1 1955 aa13.96□□□□□ -0.17
CBX3-201ENST00000337620 PRSS51A0A1B0GVH4 220 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 GALR2O43603 387 aaPredicted RBP13.96□□□□□ -0.18
CBX3-201ENST00000337620 SCN2BO60939 215 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 ERN1O75460 977 aaKnown RBP13.96□□□□□ -0.18
CBX3-201ENST00000337620 C9P02748 559 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 DDCP20711 480 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 CDKN2CP42773 168 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 TSFMP43897 325 aaKnown RBP13.96□□□□□ -0.18
CBX3-201ENST00000337620 MTPNP58546 118 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 TRA2BP62995 288 aaKnown RBP13.96□□□□□ -0.18
CBX3-201ENST00000337620 SNRPNP63162 240 aaKnown RBP13.96□□□□□ -0.18
CBX3-201ENST00000337620 PDE7AQ13946 482 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 SUZ12Q15022 739 aaKnown RBP13.96□□□□□ -0.18
CBX3-201ENST00000337620 GTDC1Q4AE62 458 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 SNAP47Q5SQN1 464 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 ANXA8L1Q5VT79 327 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 TCEAL6Q6IPX3 200 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 GUSBP11Q6P575 273 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 PLXDC1Q8IUK5 500 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 DNAJB8Q8NHS0 232 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 TCEAL3Q969E4 200 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 MTERF3Q96E29 417 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 NLNQ9BYT8 704 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 BHLHE41Q9C0J9 482 aaPredicted RBP13.96□□□□□ -0.18
CBX3-201ENST00000337620 PAIP1Q9H074 479 aaKnown RBP13.96□□□□□ -0.18
CBX3-201ENST00000337620 SLC6A13Q9NSD5 602 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 GMPR2Q9P2T1 348 aaKnown RBP13.96□□□□□ -0.18
CBX3-201ENST00000337620 CD300AQ9UGN4 299 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 PCDHB14Q9Y5E9 798 aa13.96□□□□□ -0.18
CBX3-201ENST00000337620 SCN3AQ9NY46 2000 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 A0A096LPI6 279 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 CASC3O15234 703 aaKnown RBP13.95□□□□□ -0.18
CBX3-201ENST00000337620 ZSCAN9O15535 394 aaPredicted RBP13.95□□□□□ -0.18
CBX3-201ENST00000337620 MAP3K7O43318 606 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 EPN2O95208 641 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 CTSBP07858 339 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 ENGP17813 658 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 CD1CP29017 333 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 MLLT3P42568 568 aaPredicted RBP13.95□□□□□ -0.18
CBX3-201ENST00000337620 GSTM5P46439 218 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 ATXN3P54252 364 aaPredicted RBP13.95□□□□□ -0.18
CBX3-201ENST00000337620 CFHR1Q03591 330 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 NR1D2Q14995 579 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 MUM1Q2TAK8 710 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 DEFB134Q4QY38 66 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 NDUFAF5Q5TEU4 345 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 FAM180BQ6P0A1 224 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 ZC3H14Q6PJT7 736 aaKnown RBP13.95□□□□□ -0.18
CBX3-201ENST00000337620 ABHD13Q7L211 337 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 DNAJC22Q8N4W6 341 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 HIPK4Q8NE63 616 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 OR6C4Q8NGE1 309 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 CIDECQ96AQ7 238 aaPredicted RBP13.95□□□□□ -0.18
CBX3-201ENST00000337620 ANKRD27Q96NW4 1050 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 GBP5Q96PP8 586 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 CD180Q99467 661 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 THUMPD3Q9BV44 507 aaKnown RBP13.95□□□□□ -0.18
CBX3-201ENST00000337620 PDE7BQ9NP56 450 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 C11orf16Q9NQ32 467 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 SLC25A37Q9NYZ2 338 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 ASXL3Q9C0F0 2248 aa13.95□□□□□ -0.18
CBX3-201ENST00000337620 C15orf38-AP3S2A0A0A6YYH1 394 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 LY6G6EA0A0G2JKS1 128 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 KHNYNO15037 678 aaKnown RBP13.94□□□□□ -0.18
CBX3-201ENST00000337620 NVLO15381 856 aaKnown RBP13.94□□□□□ -0.18
CBX3-201ENST00000337620 SEPHS1P49903 392 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 SELPLGQ14242 412 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 PRSS53Q2L4Q9 553 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 MANEAQ5SRI9 462 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 ZNF621Q6ZSS3 439 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 SPRED1Q7Z699 444 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 ARPINQ7Z6K5 226 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 IFNEQ86WN2 208 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 MSRB3Q8IXL7 192 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 ZCCHC7Q8N3Z6 543 aaKnown RBP13.94□□□□□ -0.18
CBX3-201ENST00000337620 UCN3Q969E3 161 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 LOXL4Q96JB6 756 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 PCDHAC1Q9H158 963 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 PIF1Q9H611 641 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 TMEM9Q9P0T7 183 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 C5AR2Q9P296 337 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 MRPS2Q9Y399 296 aaKnown RBP13.94□□□□□ -0.18
CBX3-201ENST00000337620 ATG4BQ9Y4P1 393 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 ASB4Q9Y574 426 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 U3KQA8 63 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 GUCY1B2O75343 617 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 ZBTB11O95625 1053 aaPredicted RBP13.94□□□□□ -0.18
CBX3-201ENST00000337620 SMIM10L1P0DMW3 83 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 ALOX12P18054 663 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 TRPC1P48995 793 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 ARL4DP49703 201 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 ACTR3P61158 418 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 MS4A2Q01362 244 aa13.94□□□□□ -0.18
CBX3-201ENST00000337620 MPEG1Q2M385 716 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms