RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 TRMT61BQ9BVS5 477 aaKnown RBP8.45□□□□□ -1.06
SNCA-201ENST00000336904 SGPP1Q9BX95 441 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 NKX2-4Q9H2Z4 354 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 RAD21L1Q9H4I0 556 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 EPS8L2Q9H6S3 715 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 KCNK12Q9HB15 430 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 CORINQ9Y5Q5 1042 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.45□□□□□ -1.06
SNCA-201ENST00000336904 TNFRSF11BO00300 401 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 B4GALT2O60909 372 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 SLC35G4P0C7Q5 338 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 ARHGDIAP52565 204 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 EMP3P54852 163 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 KCNC3Q14003 757 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 CLCA4Q14CN2 919 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 NPTX1Q15818 432 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 SPDYE7PQ495Y7 208 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 GALNT18Q6P9A2 607 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 TTC23LQ6PF05 361 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 BORAQ6PGQ7 559 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 EIF3MQ7L2H7 374 aaKnown RBP8.45□□□□□ -1.06
SNCA-201ENST00000336904 BCDIN3DQ7Z5W3 292 aaKnown RBP8.45□□□□□ -1.06
SNCA-201ENST00000336904 LRRTM4Q86VH4 590 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 GPR65Q8IYL9 337 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 HORMAD2Q8N7B1 307 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 C11orf65Q8NCR3 313 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 PJA1Q8NG27 643 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 OR13F1Q8NGS4 319 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 NDNFQ8TB73 568 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 FAM81AQ8TBF8 368 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 WFIKKN2Q8TEU8 576 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 EZH1Q92800 747 aaPredicted RBP8.45□□□□□ -1.06
SNCA-201ENST00000336904 FCRL1Q96LA6 429 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 CHST8Q9H2A9 424 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 EQTNQ9NQ60 294 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 NDUFAF4Q9P032 175 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 SNX5Q9Y5X3 404 aa8.45□□□□□ -1.06
SNCA-201ENST00000336904 TBC1D3DA0A087WVF3 549 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 TBC1D3IA0A087WXS9 549 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 TBC1D3EA0A087X179 549 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 TBC1D3KA0A087X1G2 549 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 TBC1D3FA6NER0 549 aaPredicted RBP8.44□□□□□ -1.06
SNCA-201ENST00000336904 TBC1D3LB9A6J9 549 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 C1QTNF3-AMACRE9PGA6 284 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 QSOX1O00391 747 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 UGDHO60701 494 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 TBC1D3HP0C7X1 549 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 DNAJA1P31689 397 aaKnown RBP8.44□□□□□ -1.06
SNCA-201ENST00000336904 RANBP1P43487 201 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 CRISP3P54108 245 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 MANFP55145 182 aaKnown RBP8.44□□□□□ -1.06
SNCA-201ENST00000336904 NCS1P62166 190 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 NFATC3Q12968 1075 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 ATP1A4Q13733 1029 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 TBC1D3GQ6DHY5 549 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 TBC1D3CQ6IPX1 549 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 KLHL35Q6PF15 583 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 CEACAM20Q6UY09 585 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 PDZD3Q86UT5 571 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 HIPK1Q86Z02 1210 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 NRSN1Q8IZ57 195 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 TBC1D3Q8IZP1 549 aaPredicted RBP8.44□□□□□ -1.06
SNCA-201ENST00000336904 TMEM145Q8NBT3 493 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 PSD4Q8NDX1 1056 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 B4GALNT2Q8NHY0 566 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 RAD51AP1Q96B01 352 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 LRIG1Q96JA1 1093 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 RNF167Q9H6Y7 350 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 WDR26Q9H7D7 661 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 BRF2Q9HAW0 419 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 TM9SF3Q9HD45 589 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 TMEM45AQ9NWC5 275 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 ADPRHL2Q9NX46 363 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 FBXL12Q9NXK8 326 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 SPHK1Q9NYA1 384 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 SCHIP1Q9P0W5 487 aaPredicted RBP8.44□□□□□ -1.06
SNCA-201ENST00000336904 RPS6KA6Q9UK32 745 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 FBXW2Q9UKT8 454 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 A0A1W2PQU0 124 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 POM121BA6NF01 834 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 NOL3O60936 208 aaKnown RBP8.44□□□□□ -1.06
SNCA-201ENST00000336904 C9P02748 559 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 MAGEA2P43356 314 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 ASMTP46597 345 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 PPP2CBP62714 309 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 PPP2CAP67775 309 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 CDK6Q00534 326 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 IQCCQ4KMZ1 466 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 BCL7AQ4VC05 210 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 ZNF542PQ5EBM4 170 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 PAGE2BQ5JRK9 111 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 GCNT6Q5T4J0 391 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 FAM71E1Q6IPT2 247 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 DEF8Q6ZN54 512 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 GPR155Q7Z3F1 870 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 SLC9B2Q86UD5 537 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 TMEFF1Q8IYR6 380 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 FBXL6Q8N531 539 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 TMIEQ8NEW7 156 aa8.44□□□□□ -1.06
SNCA-201ENST00000336904 OR8K5Q8NH50 307 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms