RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 BEX1Q9HBH7 125 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 SPHK2Q9NRA0 654 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 AHSPQ9NZD4 102 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 SPIN1Q9Y657 262 aaPredicted RBP7.9□□□□□ -1.15
HPS4-201ENST00000336873 MED12Q93074 2177 aa7.9□□□□□ -1.15
HPS4-201ENST00000336873 HTR3EA5X5Y0 456 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 CTDSP2O14595 271 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 FUCA1P04066 466 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 MYOGP15173 224 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 AMD1P17707 334 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 LAG3P18627 525 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 IDUAP35475 653 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 KRT20P35900 424 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 CCR2P41597 374 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 GSTM5P46439 218 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 SLC6A11P48066 632 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 TAS2R41P59536 307 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 CSNK2BP67870 215 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 OLR1P78380 273 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 ELP6Q0PNE2 266 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 NCF4Q15080 339 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 GPR68Q15743 365 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 PRAMEF14Q5SWL7 426 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 LYPLAL1Q5VWZ2 237 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 CPZQ66K79 652 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 RBM45Q8IUH3 476 aaKnown RBP7.89□□□□□ -1.15
HPS4-201ENST00000336873 TMEFF1Q8IYR6 380 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 KRT78Q8N1N4 520 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 MFSD2AQ8NA29 543 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 CMTM7Q96FZ5 175 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 NIPSNAP1Q9BPW8 284 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 BRINP2Q9C0B6 783 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 GIN1Q9NXP7 522 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 RNF6Q9Y252 685 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 ASXL3Q9C0F0 2248 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 CASKO14936 926 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 TNFRSF21O75509 655 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 UGT2B17O75795 530 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 SOX30O94993 753 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 CCNB2O95067 398 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 C1SP09871 688 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 PTPN2P17706 415 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 CNR2P34972 360 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 NR4A2P43354 598 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 BCAP31P51572 246 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 NCBP2P52298 156 aaKnown RBP eCLIP7.89□□□□□ -1.156e-6■■□□□ 11.7
HPS4-201ENST00000336873 PCDH1Q08174 1060 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 ILF2Q12905 390 aaKnown RBP7.89□□□□□ -1.15
HPS4-201ENST00000336873 TOP3AQ13472 1001 aaPredicted RBP7.89□□□□□ -1.15
HPS4-201ENST00000336873 C5orf22Q49AR2 442 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 XKR7Q5GH72 579 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 RBM48Q5RL73 367 aaKnown RBP7.89□□□□□ -1.15
HPS4-201ENST00000336873 TPRG1LQ5T0D9 272 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 PRAMEF13Q5VWM6 474 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 TPGS2Q68CL5 300 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 RNF44Q7L0R7 432 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 TCAIMQ8N3R3 496 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 FRMD1Q8N878 549 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 ZNF480Q8WV37 535 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 HDAC2Q92769 488 aaKnown RBP7.89□□□□□ -1.15
HPS4-201ENST00000336873 ZSWIM3Q96MP5 696 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 SAMD11Q96NU1 681 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 FCRL4Q96PJ5 515 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 RSPH9Q9H1X1 276 aaPredicted RBP7.89□□□□□ -1.15
HPS4-201ENST00000336873 GIMAP4Q9NUV9 329 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 CNOT11Q9UKZ1 510 aaKnown RBP7.89□□□□□ -1.15
HPS4-201ENST00000336873 IGLON5A6NGN9 336 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 H3BNC9 293 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 ADAMDEC1O15204 470 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 PCDHGA12O60330 932 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 PRSS23O95084 383 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 CD9P21926 228 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 GAB1Q13480 694 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 AQP6Q13520 282 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 ZSWIM7Q19AV6 140 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 CRTC2Q53ET0 693 aaPredicted RBP7.89□□□□□ -1.15
HPS4-201ENST00000336873 ANXA8L1Q5VT79 327 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 KHDRBS2Q5VWX1 349 aaKnown RBP7.89□□□□□ -1.15
HPS4-201ENST00000336873 ZC3H14Q6PJT7 736 aaKnown RBP7.89□□□□□ -1.15
HPS4-201ENST00000336873 ZZZ3Q8IYH5 903 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 RAB42Q8N4Z0 105 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 OR2A12Q8NGT7 310 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 ZNF675Q8TD23 568 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 OR8D1Q8WZ84 308 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 DNASE1L2Q92874 299 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 PEX13Q92968 403 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 CITED4Q96RK1 184 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 MUC13Q9H3R2 512 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 CLMPQ9H6B4 373 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 CUEDC1Q9NWM3 386 aaPredicted RBP7.89□□□□□ -1.15
HPS4-201ENST00000336873 ENTPD4Q9Y227 616 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 SNX11Q9Y5W9 270 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 GMEB1Q9Y692 573 aa7.89□□□□□ -1.15
HPS4-201ENST00000336873 PRAMEF33A0A0G2JMD5 474 aa7.88□□□□□ -1.15
HPS4-201ENST00000336873 A0A1W2PP55 124 aa7.88□□□□□ -1.15
HPS4-201ENST00000336873 EIF3FO00303 357 aaPredicted RBP7.88□□□□□ -1.15
HPS4-201ENST00000336873 GFRA2O00451 464 aa7.88□□□□□ -1.15
HPS4-201ENST00000336873 DLGAP1O14490 977 aa7.88□□□□□ -1.15
HPS4-201ENST00000336873 NDUFS4O43181 175 aa7.88□□□□□ -1.15
HPS4-201ENST00000336873 PENKP01210 267 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms