RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 FKBP14Q9NWM8 211 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 GPR83Q9NYM4 423 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 KIAA1549LQ6ZVL6 1849 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 KRBA1A5PL33 1030 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 TIMP1P01033 207 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 IFNA14P01570 189 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 IMPDH2P12268 514 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 TCEAL5Q5H9L2 206 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 ZNF605Q86T29 641 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 ZNF547Q8IVP9 402 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 RBM12BQ8IXT5 1001 aaKnown RBP22.36■■□□□ 1.17
NDEL1-201ENST00000334527 MTERF3Q96E29 417 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 PIP5K1AQ99755 562 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 RAB23Q9ULC3 237 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 NOTCH4Q99466 2003 aa22.36■■□□□ 1.17
NDEL1-201ENST00000334527 ZSCAN9O15535 394 aaPredicted RBP22.35■■□□□ 1.17
NDEL1-201ENST00000334527 POU2F1P14859 743 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 PIK3CBP42338 1070 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 XCR1P46094 333 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 FOXD4Q12950 439 aaPredicted RBP22.35■■□□□ 1.17
NDEL1-201ENST00000334527 NFE2L1Q14494 772 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 C12orf40Q86WS4 652 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 DEPDC4Q8N2C3 294 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 C2orf73Q8N5S3 287 aaPredicted RBP22.35■■□□□ 1.17
NDEL1-201ENST00000334527 MRPL43Q8N983 215 aaKnown RBP22.35■■□□□ 1.17
NDEL1-201ENST00000334527 MCFD2Q8NI22 146 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 IL17FQ96PD4 163 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 DSN1Q9H410 356 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 MIEF1Q9NQG6 463 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 TRIM43BA6NCK2 446 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 PLK4O00444 970 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 PCDH17O14917 1159 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 POP7O75817 140 aaKnown RBP22.35■■□□□ 1.17
NDEL1-201ENST00000334527 KRT75O95678 551 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 PRNPP04156 253 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 CYP17A1P05093 508 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 GADD45AP24522 165 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 FAM180BQ6P0A1 224 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 TRIM43Q96BQ3 446 aaPredicted RBP22.35■■□□□ 1.17
NDEL1-201ENST00000334527 SLC6A16Q9GZN6 736 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 PRDM8Q9NQV8 689 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 ACER3Q9NUN7 267 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 IMPAD1Q9NX62 359 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 ANGPT4Q9Y264 503 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 IRAK3Q9Y616 596 aa22.35■■□□□ 1.17
NDEL1-201ENST00000334527 M0R129 80 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 SERPINB7O75635 380 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 STSP08842 583 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 ARAFP10398 606 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 ADH5P11766 374 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 CTSKP43235 329 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 VASPP50552 380 aaPredicted RBP22.34■■□□□ 1.17
NDEL1-201ENST00000334527 GANABQ14697 944 aaKnown RBP22.34■■□□□ 1.17
NDEL1-201ENST00000334527 ARMC8Q8IUR7 673 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 DENND6BQ8NEG7 585 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 GTPBP3Q969Y2 492 aaKnown RBP22.34■■□□□ 1.17
NDEL1-201ENST00000334527 FAM129BQ96TA1 746 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 PLAGL1Q9UM63 463 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 FAM32AQ9Y421 112 aaKnown RBP22.34■■□□□ 1.17
NDEL1-201ENST00000334527 SLC9A3R1O14745 358 aaPredicted RBP22.34■■□□□ 1.17
NDEL1-201ENST00000334527 C6P13671 934 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 GABRB1P18505 474 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 FUT4P22083 530 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 VEGFBP49765 207 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 PCBP3P57721 371 aaKnown RBP22.34■■□□□ 1.17
NDEL1-201ENST00000334527 PRAMEF14Q5SWL7 426 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 PRAMEF13Q5VWM6 474 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 TMIGD1Q6UXZ0 262 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 VN1R5Q7Z5H4 357 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 STX19Q8N4C7 294 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 ZNF675Q8TD23 568 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 UBE2E3Q969T4 207 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 ARRDC3Q96B67 414 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 FAM210AQ96ND0 272 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 SAGE1Q9NXZ1 904 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 TAAR2Q9P1P5 351 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 DUSP12Q9UNI6 340 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 SNX8Q9Y5X2 465 aa22.34■■□□□ 1.17
NDEL1-201ENST00000334527 A8MVJ9 347 aa22.33■■□□□ 1.17
NDEL1-201ENST00000334527 MMP20O60882 483 aa22.33■■□□□ 1.17
NDEL1-201ENST00000334527 GADD45GO95257 159 aa22.33■■□□□ 1.17
NDEL1-201ENST00000334527 ACADLP28330 430 aa22.33■■□□□ 1.17
NDEL1-201ENST00000334527 TUBA1BP68363 451 aa22.33■■□□□ 1.17
NDEL1-201ENST00000334527 CBX3Q13185 183 aa22.33■■□□□ 1.17
NDEL1-201ENST00000334527 IKBIPQ70UQ0 350 aa22.33■■□□□ 1.17
NDEL1-201ENST00000334527 TUBA1AQ71U36 451 aa22.33■■□□□ 1.17
NDEL1-201ENST00000334527 GRASPQ7Z6J2 395 aaPredicted RBP22.33■■□□□ 1.17
NDEL1-201ENST00000334527 ZBTB8BQ8NAP8 495 aaPredicted RBP22.33■■□□□ 1.17
NDEL1-201ENST00000334527 MINDY2Q8NBR6 621 aa22.33■■□□□ 1.17
NDEL1-201ENST00000334527 LRRC3BQ96PB8 259 aa22.33■■□□□ 1.17
NDEL1-201ENST00000334527 ZDHHC5Q9C0B5 715 aa22.33■■□□□ 1.17
NDEL1-201ENST00000334527 HCN4Q9Y3Q4 1203 aa22.33■■□□□ 1.17
NDEL1-201ENST00000334527 TRBC2A0A5B9 178 aa22.33■■□□□ 1.16
NDEL1-201ENST00000334527 PI15O43692 258 aa22.33■■□□□ 1.16
NDEL1-201ENST00000334527 LZTS3O60299 673 aaPredicted RBP22.33■■□□□ 1.16
NDEL1-201ENST00000334527 CCNB2O95067 398 aa22.33■■□□□ 1.16
NDEL1-201ENST00000334527 PAPLNO95428 1278 aa22.33■■□□□ 1.16
NDEL1-201ENST00000334527 UGT2B10P36537 528 aa22.33■■□□□ 1.16
NDEL1-201ENST00000334527 LIMS1P48059 325 aa22.33■■□□□ 1.16
NDEL1-201ENST00000334527 DSTNP60981 165 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms