RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ARNTL2Q8WYA1 636 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 ADAD1Q96M93 576 aaKnown RBP5.34□□□□□ -1.55
PTPRB-202ENST00000334414 OR2M4Q96R27 311 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 ELP3Q9H9T3 547 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 CD300AQ9UGN4 299 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 UBIAD1Q9Y5Z9 338 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 POMT1Q9Y6A1 747 aa5.34□□□□□ -1.55
PTPRB-202ENST00000334414 LOC100509620A0A075B734 347 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 BOLA2-SMG1P6H3BVE0 249 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 E2F3O00716 465 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 PCDH7O60245 1069 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF286BP0CG31 522 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF43P17038 809 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF30P17039 623 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 SERPINF1P36955 418 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 OR6T1Q8NGN1 323 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 ADAMTS18Q8TE60 1221 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 FAM46BQ96A09 425 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 AKTIPQ9H8T0 292 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 FKBPLQ9UIM3 349 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 ATF5Q9Y2D1 282 aaPredicted RBP5.34□□□□□ -1.56
PTPRB-202ENST00000334414 A0A1W2PRB8 838 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 EME2A4GXA9 379 aaPredicted RBP5.34□□□□□ -1.56
PTPRB-202ENST00000334414 CLIC1O00299 241 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 M6PRP20645 277 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 ADAMTS16Q8TE57 1224 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 TLE6Q9H808 572 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 RPS10P5Q9NQ39 176 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 PRMT8Q9NR22 394 aaPredicted RBP5.34□□□□□ -1.56
PTPRB-202ENST00000334414 IL17RBQ9NRM6 502 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 TMEM39AQ9NV64 488 aa5.34□□□□□ -1.56
PTPRB-202ENST00000334414 C2CD4BA6NLJ0 364 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 OAS1P00973 400 aaKnown RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CALCRP30988 508 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 POLR2HP52434 150 aaKnown RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 GALK2Q01415 458 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 MEP1AQ16819 746 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 PDE12Q6L8Q7 609 aaKnown RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 BRAT1Q6PJG6 821 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 LARP4Q71RC2 724 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 MUL1Q969V5 352 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 BMFQ96LC9 184 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 ASF1BQ9NVP2 202 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 PRSS51A0A1B0GVH4 220 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 J3QRK9 145 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 SYN3O14994 580 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 HTR3BO95264 441 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 IL4RP24394 825 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 ITPKBP27987 946 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 MAN2A2P49641 1150 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 SRPXP78539 464 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 FRG2Q64ET8 278 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 ASRGL1Q7L266 308 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 OR4F6Q8NGB9 312 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 SLC35B2Q8TB61 432 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 FBXL8Q96CD0 374 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 FCRL1Q96LA6 429 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 FRG2BQ96QU4 278 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 KCNIP2Q9NS61 270 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 FBXO7Q9Y3I1 522 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 SLC35F4A4IF30 521 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 GGT3PA6NGU5 568 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 D6RAR5 112 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 SCDO00767 359 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 TP73O15350 636 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 TLL1O43897 1013 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 DFFBO76075 338 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 PLATP00750 562 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 PRKCAP17252 672 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 HOXA9P31269 272 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 GGT2P36268 569 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 KCNC1P48547 511 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 THBS3P49746 956 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CYBRD1Q53TN4 286 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 DPY19L2P1Q6NXN4 242 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 SLC39A4Q6P5W5 647 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 TPRA1Q86W33 373 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 LACC1Q8IV20 430 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 KCT2Q8NC54 265 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 FBXO22Q8NEZ5 403 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 GRIN3AQ8TCU5 1115 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 MYLIPQ8WY64 445 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 HAS1Q92839 578 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 FOXRED1Q96CU9 486 aaPredicted RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 RIPOR3Q96MK2 946 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 MROQ9BYG7 248 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 BRINP2Q9C0B6 783 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 TEX10Q9NXF1 929 aaPredicted RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CNOT2Q9NZN8 540 aaKnown RBP5.33□□□□□ -1.56
PTPRB-202ENST00000334414 A3GALT2U3KPV4 340 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 INPPL1O15357 1258 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 BEST1O76090 585 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 OR4F21O95013 312 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 ENGP17813 658 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 GGT1P19440 569 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 CPT2P23786 658 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 ASPAP45381 313 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 HK3P52790 923 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 SCGB2A2Q13296 93 aa5.33□□□□□ -1.56
PTPRB-202ENST00000334414 MYLK3Q32MK0 819 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms