RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 NT5DC2Q9H857 520 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 HEXA-AS1Q9H8Q6 139 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 FLRT1Q9NZU1 646 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 DHRS7Q9Y394 339 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 CDH10Q9Y6N8 788 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 LOC102723532A0A0G2JNH3 316 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 LOC730098B7Z3J9 87 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 PLOD3O60568 738 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 NAT2P11245 290 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 SDC1P18827 310 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 GDF5P43026 501 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 RAB14P61106 215 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 B2MP61769 119 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 FAM189BP81408 668 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 STK11Q15831 433 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 KLHL22Q53GT1 634 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 UBE2Q1Q7Z7E8 422 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 LILRB1Q8NHL6 650 aaPredicted RBP23.34■■□□□ 1.33
SOX1-201ENST00000330949 TMEM43Q9BTV4 400 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 SLC25A19Q9HC21 320 aa23.34■■□□□ 1.33
SOX1-201ENST00000330949 PRDM5Q9NQX1 630 aaPredicted RBP23.34■■□□□ 1.33
SOX1-201ENST00000330949 GPR182O15218 404 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 B3GAT3O94766 335 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 IGHA2P01877 340 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 CTPS1P17812 591 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 PTBP1P26599 531 aaKnown RBP eCLIP23.33■■□□□ 1.33
SOX1-201ENST00000330949 WEE1P30291 646 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 BTG1P62324 171 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 MTAPQ13126 283 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 NCF4Q15080 339 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 TIGD5Q53EQ6 642 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 SDHAF4Q5VUM1 108 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 FAM46DQ8NEK8 389 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 PROKR2Q8NFJ6 384 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 ZSWIM3Q96MP5 696 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 KCTD7Q96MP8 289 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 SORCS2Q96PQ0 1159 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 KCNJ15Q99712 375 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 MED28Q9H204 178 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 UBQLN2Q9UHD9 624 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 FKBP7Q9Y680 259 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 A0A1B0GVM2 712 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 A0A1W2PRG6 482 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 ZAR1LA6NP61 321 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 CHP2O43745 196 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 HBQ1P09105 142 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 PCSK1P29120 753 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 MC4RP32245 332 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 GBX2P52951 348 aaPredicted RBP23.33■■□□□ 1.33
SOX1-201ENST00000330949 LDLRAD1Q5T700 205 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 C22orf42Q6IC83 251 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 OR9Q2Q8NGE9 314 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 TRIB3Q96RU7 358 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 SOSTQ9BQB4 213 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 RTP3Q9BQQ7 232 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 NCKAP1Q9Y2A7 1128 aa23.33■■□□□ 1.33
SOX1-201ENST00000330949 QSOX1O00391 747 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 THP07101 528 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 EPB42P16452 691 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 SELENOWP63302 87 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 ZNF284Q2VY69 593 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 CNIH2Q6PI25 160 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 NANOGP1Q8N7R0 232 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 TLR8Q9NR97 1041 aaKnown RBP23.32■■□□□ 1.32
SOX1-201ENST00000330949 CUEDC1Q9NWM3 386 aaPredicted RBP23.32■■□□□ 1.32
SOX1-201ENST00000330949 SRRDQ9UH36 339 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 MBLAC1A4D2B0 266 aaPredicted RBP23.32■■□□□ 1.32
SOX1-201ENST00000330949 MOXD2PA6NHM9 499 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 IQCF5A8MTL0 148 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 SGK494L7N484 410 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 POU2F1P14859 743 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 AQP1P29972 269 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 CNR2P34972 360 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 PTGER3P43115 390 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 CDC42EP1Q00587 391 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 ALFQ53S48 1182 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 ZRANB3Q5FWF4 1079 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 TMEM81Q6P7N7 255 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 ZNF730Q6ZMV8 503 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 PIH1D2Q8WWB5 315 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 ZIC5Q96T25 663 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 NELL2Q99435 816 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 ZFP64Q9NPA5 681 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 FZD3Q9NPG1 666 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 OARD1Q9Y530 152 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 PLXNB2O15031 1838 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 ALPK3Q96L96 1907 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 ENTPD6O75354 484 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 HK1P19367 917 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 PLEKHH3Q7Z736 793 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 PDZD3Q86UT5 571 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 RBPMSQ93062 196 aaKnown RBP23.32■■□□□ 1.32
SOX1-201ENST00000330949 SERPINB11Q96P15 392 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 FAM126AQ9BYI3 521 aaPredicted RBP23.32■■□□□ 1.32
SOX1-201ENST00000330949 SLC28A3Q9HAS3 691 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 EMC7Q9NPA0 242 aa23.32■■□□□ 1.32
SOX1-201ENST00000330949 PPM1BO75688 479 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 OR4Q2P0C623 313 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 SRCP12931 536 aa23.31■■□□□ 1.32
SOX1-201ENST00000330949 PSMA3P25788 255 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms