RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 BIDP55957 195 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 PDGFRLQ15198 375 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 GSG1LQ6UXU4 331 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 COX15Q7KZN9 410 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 CCL16O15467 120 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 LGALS2P05162 132 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 WDR4P57081 412 aaKnown RBP12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 PARP15Q460N3 678 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ZC3H14Q6PJT7 736 aaKnown RBP12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 BEND7Q8N7W2 519 aaPredicted RBP12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ZNF596Q8TC21 504 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 LCN9Q8WX39 176 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 DCUN1D4Q92564 292 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 OSTF1Q92882 214 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 TBL1XR1Q9BZK7 514 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 TMEM248Q9NWD8 314 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 PCDHB14Q9Y5E9 798 aa12.34□□□□□ -0.43
RAB11FIP1-202ENST00000330843 TRAV20A0A0B4J274 112 aa12.33□□□□□ -0.43
RAB11FIP1-202ENST00000330843 A0A0G2JMP0 313 aa12.33□□□□□ -0.43
RAB11FIP1-202ENST00000330843 SCDO00767 359 aa12.33□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ADAM10O14672 748 aa12.33□□□□□ -0.43
RAB11FIP1-202ENST00000330843 C8orf89P0DMQ9 161 aa12.33□□□□□ -0.43
RAB11FIP1-202ENST00000330843 CFL1P23528 166 aaKnown RBP12.33□□□□□ -0.43
RAB11FIP1-202ENST00000330843 OR4M2Q8NGB6 313 aa12.33□□□□□ -0.43
RAB11FIP1-202ENST00000330843 ZNF420Q8TAQ5 688 aaPredicted RBP12.33□□□□□ -0.43
RAB11FIP1-202ENST00000330843 NINJ1Q92982 152 aa12.33□□□□□ -0.43
RAB11FIP1-202ENST00000330843 OVOS2A0A0J9YW53 1432 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 OVOS2Q6IE36 1432 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 CDC7O00311 574 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 GRM6O15303 877 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 ZNF8P17098 575 aaPredicted RBP12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 HNRNPKP61978 463 aaKnown RBP eCLIP12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 MYRFLQ96LU7 910 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 ICKQ9UPZ9 632 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 CFAP20Q9Y6A4 193 aaKnown RBP12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 ADAMTS3O15072 1205 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 LDB2O43679 373 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 ALDOBP05062 364 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 SERPINA7P05543 415 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 OR4Q2P0C623 313 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 GABRR2P28476 465 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 BMXP51813 675 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 TMBIM6P55061 237 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 TSTD2Q5T7W7 516 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 AKT1S1Q96B36 256 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 CGREF1Q99674 301 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 WDR18Q9BV38 432 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 TMEM121BQ9BXQ6 578 aaPredicted RBP12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 ZNF436Q9C0F3 470 aaPredicted RBP12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 EVA1BQ9NVM1 165 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 SH3BGRL2Q9UJC5 107 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 EFCAB7A8K855 629 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 PDHXO00330 501 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 NKRFO15226 690 aaKnown RBP eCLIP12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 ENDOUP21128 410 aaKnown RBP12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 TLE3Q04726 772 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 COL9A2Q14055 689 aaPredicted RBP12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 NTRK2Q16620 822 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 UGCGQ16739 394 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 FAM109AQ8N4B1 249 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 RPL10LQ96L21 214 aaKnown RBP12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 DGAT2Q96PD7 388 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 ZCCHC3Q9NUD5 404 aaKnown RBP12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 INSIG1O15503 277 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 NDUFS4O43181 175 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 BRINP1O60477 761 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 MAS1P04201 325 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 C8GP07360 202 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 PTPRAP18433 802 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 ZNF367Q7RTV3 350 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 SUMF2Q8NBJ7 301 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 GPRC5BQ9NZH0 403 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 WASF3Q9UPY6 502 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 NIPSNAP2O75323 286 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 DUOXA1Q1HG43 343 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 SMYD5Q6GMV2 418 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 STRADAQ7RTN6 431 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 LILRB4Q8NHJ6 448 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 NELL2Q99435 816 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 FGFBP2Q9BYJ0 223 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 SDCBP2Q9H190 292 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 ZBTB20Q9HC78 741 aaPredicted RBP12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 KCNJ16Q9NPI9 418 aa12.33□□□□□ -0.44
RAB11FIP1-202ENST00000330843 C11orf98E9PRG8 122 aa12.32□□□□□ -0.44
RAB11FIP1-202ENST00000330843 CST3P01034 146 aaPredicted RBP12.32□□□□□ -0.44
RAB11FIP1-202ENST00000330843 PDYNP01213 254 aa12.32□□□□□ -0.44
RAB11FIP1-202ENST00000330843 ERVFC1P60507 584 aa12.32□□□□□ -0.44
RAB11FIP1-202ENST00000330843 RABL3Q5HYI8 236 aa12.32□□□□□ -0.44
RAB11FIP1-202ENST00000330843 ZNF551Q7Z340 670 aaPredicted RBP12.32□□□□□ -0.44
RAB11FIP1-202ENST00000330843 NRROSQ86YC3 692 aa12.32□□□□□ -0.44
RAB11FIP1-202ENST00000330843 OR4C5Q8NGB2 326 aa12.32□□□□□ -0.44
RAB11FIP1-202ENST00000330843 SDSLQ96GA7 329 aa12.32□□□□□ -0.44
RAB11FIP1-202ENST00000330843 HDHD5Q9BXW7 423 aa12.32□□□□□ -0.44
RAB11FIP1-202ENST00000330843 XPNPEP1Q9NQW7 623 aa12.32□□□□□ -0.44
RAB11FIP1-202ENST00000330843 SERTAD4Q9NUC0 356 aa12.32□□□□□ -0.44
RAB11FIP1-202ENST00000330843 MGST1P10620 155 aaKnown RBP12.32□□□□□ -0.44
RAB11FIP1-202ENST00000330843 CD34P28906 385 aa12.32□□□□□ -0.44
RAB11FIP1-202ENST00000330843 FOXM1Q08050 763 aa12.32□□□□□ -0.44
RAB11FIP1-202ENST00000330843 PSMG2Q969U7 264 aa12.32□□□□□ -0.44
RAB11FIP1-202ENST00000330843 KIAA1143Q96AT1 154 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms