RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SRPRAP08240 638 aaKnown RBP14.71□□□□□ -0.05
BRCC3-201ENST00000330045 POU2F1P14859 743 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 FUT4P22083 530 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 CCR2P41597 374 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 RGS6P49758 472 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 CYP4F2P78329 520 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 CDK6Q00534 326 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 C2orf80Q0P641 193 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 TSTA3Q13630 321 aaPredicted RBP14.71□□□□□ -0.05
BRCC3-201ENST00000330045 ADIPOR2Q86V24 386 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 GEMIN6Q8WXD5 167 aaKnown RBP14.71□□□□□ -0.05
BRCC3-201ENST00000330045 CRELD1Q96HD1 420 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 VPS35Q96QK1 796 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 CORO1BQ9BR76 489 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 RNF167Q9H6Y7 350 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 TMEM165Q9HC07 324 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 ACER3Q9NUN7 267 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 MS4A12Q9NXJ0 267 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 PCDHGA4Q9Y5G9 962 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 PCDHGA3Q9Y5H0 932 aa14.71□□□□□ -0.05
BRCC3-201ENST00000330045 HELZP42694 1942 aaKnown RBP14.7□□□□□ -0.06
BRCC3-201ENST00000330045 H3BM21 787 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 M0R129 80 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 FOXE1O00358 373 aaPredicted RBP14.7□□□□□ -0.06
BRCC3-201ENST00000330045 PCDH17O14917 1159 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 CCL16O15467 120 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 EFCAB14O75071 495 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 C1orf105O95561 183 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 TGFB1P01137 390 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 C8AP07357 584 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 NPPBP16860 134 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 XPAP23025 273 aaPredicted RBP14.7□□□□□ -0.06
BRCC3-201ENST00000330045 S100A5P33763 92 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 IRS1P35568 1242 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 CHI3L1P36222 383 aaPredicted RBP14.7□□□□□ -0.06
BRCC3-201ENST00000330045 SEPHS1P49903 392 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 TBPL1P62380 186 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 OLR1P78380 273 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 EEF1A2Q05639 463 aaKnown RBP14.7□□□□□ -0.06
BRCC3-201ENST00000330045 SLBPQ14493 270 aaKnown RBP eCLIP14.7□□□□□ -0.06
BRCC3-201ENST00000330045 MPEG1Q2M385 716 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 SOWAHCQ53LP3 525 aaPredicted RBP14.7□□□□□ -0.06
BRCC3-201ENST00000330045 CRB2Q5IJ48 1285 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 STEAP3Q658P3 488 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 TECPR1Q7Z6L1 1165 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 NLRP8Q86W28 1048 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 RNF130Q86XS8 419 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.7□□□□□ -0.06
BRCC3-201ENST00000330045 POC5Q8NA72 575 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 B3GNT7Q8NFL0 401 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 OR5AK3PQ8NH89 298 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 HTRA1Q92743 480 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 PIP5K1AQ99755 562 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 CCDC59Q9P031 241 aaKnown RBP14.7□□□□□ -0.06
BRCC3-201ENST00000330045 HCN4Q9Y3Q4 1203 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 FAM32AQ9Y421 112 aaKnown RBP14.7□□□□□ -0.06
BRCC3-201ENST00000330045 GPC6Q9Y625 555 aaPredicted RBP14.7□□□□□ -0.06
BRCC3-201ENST00000330045 GRXCR1A8MXD5 290 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 PLK4O00444 970 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 IFNA14P01570 189 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 HSMCR30P0CW71 290 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 PPM1AP35813 382 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 RPL3P39023 403 aaKnown RBP14.7□□□□□ -0.06
BRCC3-201ENST00000330045 XCR1P46094 333 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 ZNF45Q02386 682 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 PDE7AQ13946 482 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 IRF3Q14653 427 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 SLC5A12Q1EHB4 618 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 ZNF630Q2M218 657 aaPredicted RBP14.7□□□□□ -0.06
BRCC3-201ENST00000330045 FAM109BQ6ICB4 259 aaPredicted RBP14.7□□□□□ -0.06
BRCC3-201ENST00000330045 LILRA6Q6PI73 481 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 WDR48Q8TAF3 677 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 C16orf78Q8WTQ4 265 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 GTPBP3Q969Y2 492 aaKnown RBP14.7□□□□□ -0.06
BRCC3-201ENST00000330045 FAM129BQ96TA1 746 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 EFCAB11Q9BUY7 163 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 OR51B5Q9H339 312 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 TRIM39Q9HCM9 518 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 DMRT3Q9NQL9 472 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 IFT52Q9Y366 437 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 DYRK1BQ9Y463 629 aa14.7□□□□□ -0.06
BRCC3-201ENST00000330045 PCM1Q15154 2024 aa14.69□□□□□ -0.06
BRCC3-201ENST00000330045 PRAMEF33A0A0G2JMD5 474 aa14.69□□□□□ -0.06
BRCC3-201ENST00000330045 PRAMEF10O60809 474 aa14.69□□□□□ -0.06
BRCC3-201ENST00000330045 GADD45GO95257 159 aa14.69□□□□□ -0.06
BRCC3-201ENST00000330045 C1GALT1C1LP0DN25 315 aa14.69□□□□□ -0.06
BRCC3-201ENST00000330045 TYRP14679 529 aa14.69□□□□□ -0.06
BRCC3-201ENST00000330045 HMGA2P52926 109 aa14.69□□□□□ -0.06
BRCC3-201ENST00000330045 CRISP3P54108 245 aa14.69□□□□□ -0.06
BRCC3-201ENST00000330045 PTGES3Q15185 160 aaKnown RBP14.69□□□□□ -0.06
BRCC3-201ENST00000330045 IER5LQ5T953 404 aa14.69□□□□□ -0.06
BRCC3-201ENST00000330045 TMEM215Q68D42 235 aa14.69□□□□□ -0.06
BRCC3-201ENST00000330045 PNCKQ6P2M8 343 aa14.69□□□□□ -0.06
BRCC3-201ENST00000330045 CHCHD6Q9BRQ6 235 aa14.69□□□□□ -0.06
BRCC3-201ENST00000330045 CENPOQ9BU64 300 aa14.69□□□□□ -0.06
BRCC3-201ENST00000330045 TMEM121BQ9BXQ6 578 aaPredicted RBP14.69□□□□□ -0.06
BRCC3-201ENST00000330045 TAS2R9Q9NYW1 312 aa14.69□□□□□ -0.06
BRCC3-201ENST00000330045 SLC6A14Q9UN76 642 aa14.69□□□□□ -0.06
BRCC3-201ENST00000330045 SH2B3Q9UQQ2 575 aa14.69□□□□□ -0.06
BRCC3-201ENST00000330045 KLK4Q9Y5K2 254 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms