RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 STX2P32856 288 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 CYB561P49447 251 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 HLCSP50747 726 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 CLCN2P51788 898 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 GPR143P51810 404 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 ETF1P62495 437 aaKnown RBP12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 PMP22Q01453 160 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 ALDH6A1Q02252 535 aaKnown RBP12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 C2orf54Q08AI8 447 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 RCN2Q14257 317 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 OR4D1Q15615 310 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 PDK4Q16654 411 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 PAGE2BQ5JRK9 111 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 PRAMEF9Q5VWM5 478 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 TRIM40Q6P9F5 258 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 GALNTL5Q7Z4T8 443 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 VN1R5Q7Z5H4 357 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 CCDC91Q7Z6B0 441 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 ZNF227Q86WZ6 799 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 SIAH3Q8IW03 269 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 KIF2BQ8N4N8 673 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 ZNF808Q8N4W9 903 aaPredicted RBP12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 POGLUT1Q8NBL1 392 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 SRFBP1Q8NEF9 429 aaKnown RBP12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 C7orf57Q8NEG2 295 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 STAG3L4Q8TBR4 150 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 FBXO25Q8TCJ0 367 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 UBTD2Q8WUN7 234 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 ITLN2Q8WWU7 325 aaPredicted RBP12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 HES7Q9BYE0 225 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 ROGDIQ9GZN7 287 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 ZNF490Q9ULM2 529 aaPredicted RBP12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 DAPP1Q9UN19 280 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 ABCA12Q86UK0 2595 aa12.69□□□□□ -0.38
GTF3C6-201ENST00000329970 DNAJC13O75165 2243 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 TRGV8A0A0C4DH27 118 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 FAM227AF5H4B4 570 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 HNRNPRO43390 633 aaKnown RBP12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 SLC19A2O60779 497 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 SLC25A12O75746 678 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 SCELO95171 688 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 SLC35E2BP0CK96 405 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 CD22P20273 847 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 SERPINB1P30740 379 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 CASQ1P31415 396 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 HSPA7P48741 367 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 MTTPP55157 894 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 CASP6P55212 293 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 MRPS25P82663 173 aaKnown RBP12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 OC90Q02509 493 aaPredicted RBP12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 GUCY2DQ02846 1103 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 TGM3Q08188 693 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 DOC2AQ14183 400 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 KBTBD12Q3ZCT8 623 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 XKR6Q5GH73 641 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 ZNF468Q5VIY5 522 aaPredicted RBP12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 ABHD17CQ6PCB6 329 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 BNC2Q6ZN30 1099 aaPredicted RBP12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 ISCA2Q86U28 154 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 CYP4X1Q8N118 509 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 VMP1Q96GC9 406 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 CCDC120Q96HB5 630 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 ATOH8Q96SQ7 321 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 DEFB126Q9BYW3 111 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 CD244Q9BZW8 370 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 UNKQ9C0B0 810 aaKnown RBP12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 NMRAL1Q9HBL8 299 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 LYRM4Q9HD34 91 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 ADAP2Q9NPF8 381 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 KLHL1Q9NR64 748 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 PRTFDC1Q9NRG1 225 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 ANKRD10Q9NXR5 420 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 NUDT4Q9NZJ9 180 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 CD274Q9NZQ7 290 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 RNF112Q9ULX5 631 aa12.68□□□□□ -0.38
GTF3C6-201ENST00000329970 CCL21O00585 134 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 CYR61O00622 381 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 KERAO60938 352 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 S100BP04271 92 aaPredicted RBP12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 EPORP19235 508 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 CRABP2P29373 138 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 MAGEA4P43358 317 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 KCNC1P48547 511 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 PLTPP55058 493 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 LIM2P55344 173 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 EFTUD2Q15029 972 aaKnown RBP eCLIP12.67□□□□□ -0.388e-11■■■■■ 46.1
GTF3C6-201ENST00000329970 ELAVL1Q15717 326 aaKnown RBP12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 HIST2H2ACQ16777 129 aaPredicted RBP12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 HIST2H2AA3Q6FI13 130 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 ZDHHC24Q6UX98 284 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 LURAP1LQ8IV03 231 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 CTAGE3PQ8IX95 158 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 SPATA6LQ8N4H0 392 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 RHEBL1Q8TAI7 183 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 CCT6BQ92526 530 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 UBE2E3Q969T4 207 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 TMEM125Q96AQ2 219 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 KCNC2Q96PR1 638 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 PRDM7Q9NQW5 492 aa12.67□□□□□ -0.38
GTF3C6-201ENST00000329970 ZNF223Q9UK11 482 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms