RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 NKD1Q969G9 470 aa15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 DPY30Q9C005 99 aa15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 RHBGQ9H310 441 aa15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 SPAG4Q9NPE6 437 aa15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 FARSBQ9NSD9 589 aaKnown RBP15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 GEMIN8Q9NWZ8 242 aaKnown RBP15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 AHSPQ9NZD4 102 aa15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 KLHL20Q9Y2M5 609 aa15.66■□□□□ 0.1
PDLIM1-201ENST00000329399 NR5A2O00482 541 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 ANKRD28O15084 1053 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 CTSBP07858 339 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 UGT2B7P16662 529 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 GSTM5P46439 218 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 HNRNPFP52597 415 aaKnown RBP15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 YBX1P67809 324 aaKnown RBP15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 HMGCS1Q01581 520 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 PRDX1Q06830 199 aaKnown RBP15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 ACSM2AQ08AH3 577 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 ACSM2BQ68CK6 577 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 ARMC6Q6NXE6 501 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 GALNT18Q6P9A2 607 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 TMIGD1Q6UXZ0 262 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 D2HGDHQ8N465 521 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 FBXO27Q8NI29 283 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 TESCQ96BS2 214 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 TRAPPC9Q96Q05 1148 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 C1orf50Q9BV19 199 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 DPH1Q9BZG8 443 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 B3GNT4Q9C0J1 378 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 PRORYQ9H606 182 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 DCLRE1BQ9H816 532 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 AKIRIN1Q9H9L7 192 aaPredicted RBP15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 FAM60AQ9NP50 221 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 SLC52A3Q9NQ40 469 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 GIMAP2Q9UG22 337 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 POLR3HQ9Y535 204 aaPredicted RBP15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 PCM1Q15154 2024 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 PIPSLA2A3N6 862 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 FBP2O00757 339 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 DNAJA2O60884 412 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 ATP6V1G2O95670 118 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 LIPCP11150 499 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 BCKDHAP12694 445 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 DDX5P17844 614 aaKnown RBP15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 PRPS1L1P21108 318 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 CDH3P22223 829 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 VARSP26640 1264 aaKnown RBP15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 GRK3P35626 688 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 RPL3P39023 403 aaKnown RBP15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 ARFIP1P53367 373 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 PSME3P61289 254 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 UFM1P61960 85 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 HSD11B2P80365 405 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 LRRC74AQ0VAA2 488 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 SLBPQ14493 270 aaKnown RBP eCLIP15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 SNCBQ16143 134 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 SAMD4BQ5PRF9 694 aaKnown RBP15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 TMEM164Q5U3C3 297 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 PWWP2BQ6NUJ5 590 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 C8orf82Q6P1X6 216 aaPredicted RBP15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 SPESP1Q6UW49 350 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 HUS1BQ8NHY5 278 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 MTFMTQ96DP5 389 aaKnown RBP15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 CD180Q99467 661 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 ASPSCR1Q9BZE9 553 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 DENND2DQ9H6A0 471 aaPredicted RBP15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 CLMPQ9H6B4 373 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 TMEM184CQ9NVA4 438 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 SLC7A8Q9UHI5 535 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 LHX6Q9UPM6 363 aa15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.65■□□□□ 0.1
PDLIM1-201ENST00000329399 CFAP46Q8IYW2 2715 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 PRICKLE3O43900 615 aaPredicted RBP15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 FKBP6O75344 327 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 STK17BO94768 372 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 SEMA3DO95025 777 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 ZBTB11O95625 1053 aaPredicted RBP15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 PCNAP12004 261 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 ME2P23368 584 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 NEK2P51955 445 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 RAB15P59190 212 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 ACTR3P61158 418 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 SRSF11Q05519 484 aaKnown RBP15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 TSTA3Q13630 321 aaPredicted RBP15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 PIGGQ5H8A4 983 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 FBXW10Q5XX13 1052 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 ICE2Q659A1 982 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 NOXRED1Q6NXP6 359 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 AAGABQ6PD74 315 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 SUSD1Q6UWL2 747 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 CEACAM20Q6UY09 585 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 LIX1Q8N485 282 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 OR9I1Q8NGQ6 314 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 CHTF18Q8WVB6 975 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 STMN2Q93045 179 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 C11orf24Q96F05 449 aaPredicted RBP15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 CDRT15Q96T59 188 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 NPAS2Q99743 824 aa15.64■□□□□ 0.09
PDLIM1-201ENST00000329399 CENPKQ9BS16 269 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms