RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 RCN2Q14257 317 aa25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 TMEM35AQ53FP2 167 aa25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 GTF2H2CQ6P1K8 395 aa25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 ADGRD1Q6QNK2 874 aa25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 CHSY3Q70JA7 882 aa25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 MYLK4Q86YV6 388 aaPredicted RBP25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 CYP4X1Q8N118 509 aa25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 AMER2Q8N7J2 671 aa25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 C19orf60Q96EN9 201 aa25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 MAGEB10Q96LZ2 347 aaPredicted RBP25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 TBCDQ9BTW9 1192 aa25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 RNF32Q9H0A6 362 aa25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 ASF1BQ9NVP2 202 aa25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 PLA2G3Q9NZ20 509 aa25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 STMN3Q9NZ72 180 aa25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 XPR1Q9UBH6 696 aa25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 MRPS33Q9Y291 106 aaKnown RBP25.93■■□□□ 1.74
ATPAF1-201ENST00000329231 SPENQ96T58 3664 aaKnown RBP25.92■■□□□ 1.74
ATPAF1-201ENST00000329231 IGKV3D-11A0A0A0MRZ8 115 aa25.92■■□□□ 1.74
ATPAF1-201ENST00000329231 LRRC14BA6NHZ5 514 aa25.92■■□□□ 1.74
ATPAF1-201ENST00000329231 CLDN4O14493 209 aa25.92■■□□□ 1.74
ATPAF1-201ENST00000329231 SMIM24O75264 130 aa25.92■■□□□ 1.74
ATPAF1-201ENST00000329231 ZNF33BQ06732 778 aa25.92■■□□□ 1.74
ATPAF1-201ENST00000329231 H3F3CQ6NXT2 135 aa25.92■■□□□ 1.74
ATPAF1-201ENST00000329231 GOLGA7Q7Z5G4 137 aa25.92■■□□□ 1.74
ATPAF1-201ENST00000329231 PTGR2Q8N8N7 351 aaPredicted RBP25.92■■□□□ 1.74
ATPAF1-201ENST00000329231 CATSPER1Q8NEC5 780 aa25.92■■□□□ 1.74
ATPAF1-201ENST00000329231 CMTM7Q96FZ5 175 aa25.92■■□□□ 1.74
ATPAF1-201ENST00000329231 ZNF354BQ96LW1 612 aa25.92■■□□□ 1.74
ATPAF1-201ENST00000329231 MRPL57Q9BQC6 102 aaKnown RBP25.92■■□□□ 1.74
ATPAF1-201ENST00000329231 IPPKQ9H8X2 491 aa25.92■■□□□ 1.74
ATPAF1-201ENST00000329231 PRDM7Q9NQW5 492 aa25.92■■□□□ 1.74
ATPAF1-201ENST00000329231 PCDHGA11Q9Y5H2 935 aa25.92■■□□□ 1.74
ATPAF1-201ENST00000329231 TCRBV16S1A1N1A0A5B0 115 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 E2F3O00716 465 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 SIX3O95343 332 aaPredicted RBP25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 GNLYP22749 145 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 CERS1P27544 350 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 GCAP28676 217 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 PIK3CBP42338 1070 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 TNFSF10P50591 281 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 HSD17B7P56937 341 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 SLC26A5P58743 744 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 SLC29A2Q14542 456 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 TIFABQ6ZNK6 161 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 CNPY4Q8N129 248 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 OR1N1Q8NGS0 311 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 REPS1Q96D71 796 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 PHF21BQ96EK2 531 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 MRPL46Q9H2W6 279 aaKnown RBP25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 NECTIN3Q9NQS3 549 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 PRTFDC1Q9NRG1 225 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 FETUBQ9UGM5 382 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 DAPP1Q9UN19 280 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 TSC22D4Q9Y3Q8 395 aa25.91■■□□□ 1.74
ATPAF1-201ENST00000329231 SCN2AQ99250 2005 aa25.9■■□□□ 1.74
ATPAF1-201ENST00000329231 TRAV17A0A0B4J275 112 aa25.9■■□□□ 1.74
ATPAF1-201ENST00000329231 STX16-NPEPL1H3BU86 382 aa25.9■■□□□ 1.74
ATPAF1-201ENST00000329231 STX16O14662 325 aa25.9■■□□□ 1.74
ATPAF1-201ENST00000329231 WDPCPO95876 746 aa25.9■■□□□ 1.74
ATPAF1-201ENST00000329231 TGFB1P01137 390 aa25.9■■□□□ 1.74
ATPAF1-201ENST00000329231 EEF1DP29692 281 aaKnown RBP25.9■■□□□ 1.74
ATPAF1-201ENST00000329231 UQCRFS1P47985 274 aa25.9■■□□□ 1.74
ATPAF1-201ENST00000329231 LIM2P55344 173 aa25.9■■□□□ 1.74
ATPAF1-201ENST00000329231 TAS2R50P59544 299 aa25.9■■□□□ 1.74
ATPAF1-201ENST00000329231 PHEXP78562 749 aa25.9■■□□□ 1.74
ATPAF1-201ENST00000329231 DDX39BQ13838 428 aaKnown RBP25.9■■□□□ 1.74
ATPAF1-201ENST00000329231 ZNF595Q8IYB9 648 aa25.9■■□□□ 1.74
ATPAF1-201ENST00000329231 HUS1BQ8NHY5 278 aa25.9■■□□□ 1.74
ATPAF1-201ENST00000329231 CENPKQ9BS16 269 aa25.9■■□□□ 1.74
ATPAF1-201ENST00000329231 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP25.9■■□□□ 1.74
ATPAF1-201ENST00000329231 AGPAT4Q9NRZ5 378 aa25.9■■□□□ 1.74
ATPAF1-201ENST00000329231 SHANK1Q9Y566 2161 aa25.89■■□□□ 1.74
ATPAF1-201ENST00000329231 IQANK1A0A1B0GTG1 560 aa25.89■■□□□ 1.74
ATPAF1-201ENST00000329231 TCP11X1B4DZS4 312 aa25.89■■□□□ 1.74
ATPAF1-201ENST00000329231 AP5B1Q2VPB7 878 aa25.89■■□□□ 1.74
ATPAF1-201ENST00000329231 ACER2Q5QJU3 275 aa25.89■■□□□ 1.74
ATPAF1-201ENST00000329231 KHDRBS2Q5VWX1 349 aaKnown RBP25.89■■□□□ 1.74
ATPAF1-201ENST00000329231 RPUSD3Q6P087 351 aaKnown RBP25.89■■□□□ 1.74
ATPAF1-201ENST00000329231 UBE3DQ7Z6J8 389 aa25.89■■□□□ 1.74
ATPAF1-201ENST00000329231 SCUBE1Q8IWY4 988 aa25.89■■□□□ 1.74
ATPAF1-201ENST00000329231 SLC5A8Q8N695 610 aa25.89■■□□□ 1.74
ATPAF1-201ENST00000329231 FAM47BQ8NA70 645 aa25.89■■□□□ 1.74
ATPAF1-201ENST00000329231 ATP6V1E2Q96A05 226 aa25.89■■□□□ 1.74
ATPAF1-201ENST00000329231 BARD1Q99728 777 aaKnown RBP25.89■■□□□ 1.74
ATPAF1-201ENST00000329231 CCDC77Q9BR77 488 aa25.89■■□□□ 1.74
ATPAF1-201ENST00000329231 EPB41L4BQ9H329 900 aa25.89■■□□□ 1.74
ATPAF1-201ENST00000329231 LYRM4Q9HD34 91 aa25.89■■□□□ 1.74
ATPAF1-201ENST00000329231 ABI3Q9P2A4 366 aa25.89■■□□□ 1.74
ATPAF1-201ENST00000329231 SAGE2PA6NJ88 616 aa25.88■■□□□ 1.73
ATPAF1-201ENST00000329231 H0YIV9 168 aa25.88■■□□□ 1.73
ATPAF1-201ENST00000329231 SH3BGRLO75368 114 aa25.88■■□□□ 1.73
ATPAF1-201ENST00000329231 ATP5A1P25705 553 aaKnown RBP25.88■■□□□ 1.73
ATPAF1-201ENST00000329231 SLC13A2Q13183 592 aa25.88■■□□□ 1.73
ATPAF1-201ENST00000329231 MEP1AQ16819 746 aa25.88■■□□□ 1.73
ATPAF1-201ENST00000329231 DEPDC1Q5TB30 811 aa25.88■■□□□ 1.73
ATPAF1-201ENST00000329231 ACOT4Q8N9L9 421 aa25.88■■□□□ 1.73
ATPAF1-201ENST00000329231 L3MBTL4Q8NA19 623 aa25.88■■□□□ 1.73
ATPAF1-201ENST00000329231 OR51B5Q9H339 312 aa25.88■■□□□ 1.73
ATPAF1-201ENST00000329231 NOL11Q9H8H0 719 aaKnown RBP25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms