RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 DEFB133Q30KQ1 61 aa17.51■□□□□ 0.39
USP39-201ENST00000323701 MTX3Q5HYI7 312 aa17.51■□□□□ 0.39
USP39-201ENST00000323701 TBCELQ5QJ74 424 aa17.51■□□□□ 0.39
USP39-201ENST00000323701 R3HCC1LQ7Z5L2 792 aaKnown RBP17.51■□□□□ 0.39
USP39-201ENST00000323701 PROSER1Q86XN7 944 aa17.51■□□□□ 0.39
USP39-201ENST00000323701 FAM47BQ8NA70 645 aa17.51■□□□□ 0.39
USP39-201ENST00000323701 TRPV3Q8NET8 790 aa17.51■□□□□ 0.39
USP39-201ENST00000323701 NETO1Q8TDF5 533 aa17.51■□□□□ 0.39
USP39-201ENST00000323701 ZFP90Q8TF47 636 aa17.51■□□□□ 0.39
USP39-201ENST00000323701 DNASE2BQ8WZ79 361 aa17.51■□□□□ 0.39
USP39-201ENST00000323701 ZNF184Q99676 751 aaPredicted RBP17.51■□□□□ 0.39
USP39-201ENST00000323701 TRIM15Q9C019 465 aa17.51■□□□□ 0.39
USP39-201ENST00000323701 GLOD5A6NK44 160 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 NOBOXO60393 691 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 EPN2O95208 641 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 KCNK5O95279 499 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 CERS1P27544 350 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 FNTBP49356 437 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 MVDP53602 400 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 ZXDAP98168 799 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 GRAMD1BQ3KR37 738 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 TMEM35AQ53FP2 167 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 CMPK2Q5EBM0 449 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.5■□□□□ 0.39
USP39-201ENST00000323701 ENPP6Q6UWR7 440 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 GALNT10Q86SR1 603 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 PTOV1Q86YD1 416 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 ARL14Q8N4G2 192 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 ACOT4Q8N9L9 421 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 VPS37AQ8NEZ2 397 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 OR2L5Q8NG80 312 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 OR10Q1Q8NGQ4 319 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 OR5AK3PQ8NH89 298 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 NSMCE2Q96MF7 247 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 KLHL4Q9C0H6 718 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 UTS2RQ9UKP6 389 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 MAPRE3Q9UPY8 281 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 ATG4BQ9Y4P1 393 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 FAM220BPB1ANY3 271 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 CXCR6O00574 342 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 HIST1H1TP22492 207 aaPredicted RBP17.5■□□□□ 0.39
USP39-201ENST00000323701 ATP5A1P25705 553 aaKnown RBP17.5■□□□□ 0.39
USP39-201ENST00000323701 PSMA4P25789 261 aaKnown RBP17.5■□□□□ 0.39
USP39-201ENST00000323701 ABHD18Q0P651 414 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 ELOCQ15369 112 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 AASDHQ4L235 1098 aaPredicted RBP17.5■□□□□ 0.39
USP39-201ENST00000323701 COX20Q5RI15 118 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 ZCCHC8Q6NZY4 707 aaKnown RBP17.5■□□□□ 0.39
USP39-201ENST00000323701 GOT1L1Q8NHS2 421 aaPredicted RBP17.5■□□□□ 0.39
USP39-201ENST00000323701 MTERF3Q96E29 417 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 CHST8Q9H2A9 424 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 GORASP2Q9H8Y8 452 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 ATAD3AQ9NVI7 634 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 ADAM29Q9UKF5 820 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 ASB4Q9Y574 426 aa17.5■□□□□ 0.39
USP39-201ENST00000323701 OR5K3A6NET4 321 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 C2orf74A8MZ97 194 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 DNAJB6O75190 326 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 SMNDC1O75940 238 aaKnown RBP eCLIP17.49■□□□□ 0.39
USP39-201ENST00000323701 CAPNS1P04632 268 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 CTSBP07858 339 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 ANXA6P08133 673 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 FAM58BPP0C7Q3 252 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 ACADSP16219 412 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 PAX7P23759 505 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 RPS15AP62244 130 aaKnown RBP17.49■□□□□ 0.39
USP39-201ENST00000323701 SLAMF1Q13291 335 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.49■□□□□ 0.39
USP39-201ENST00000323701 NDUFAF5Q5TEU4 345 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 SLC36A4Q6YBV0 504 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 PDSS2Q86YH6 399 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 ZZZ3Q8IYH5 903 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 EXOSC8Q96B26 276 aaKnown RBP17.49■□□□□ 0.39
USP39-201ENST00000323701 TM4SF19Q96DZ7 209 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 REXO5Q96IC2 774 aaKnown RBP17.49■□□□□ 0.39
USP39-201ENST00000323701 KCNC2Q96PR1 638 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 DUSP15Q9H1R2 295 aaPredicted RBP17.49■□□□□ 0.39
USP39-201ENST00000323701 TMEM74BQ9NUR3 256 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 A0A1W2PR48 441 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 A0A1W2PRB8 838 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 A0A1W2PS29 197 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 EVPLLA8MZ36 301 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 GSTA4O15217 222 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 BCAT2O15382 392 aaPredicted RBP17.49■□□□□ 0.39
USP39-201ENST00000323701 AQP9O43315 295 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 ZCCHC18P0CG32 403 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 PTGER1P34995 402 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 POLE2P56282 527 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 MRM1Q6IN84 353 aaKnown RBP17.49■□□□□ 0.39
USP39-201ENST00000323701 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.49■□□□□ 0.39
USP39-201ENST00000323701 FBXO30Q8TB52 745 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 MAL2Q969L2 176 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 PPWD1Q96BP3 646 aaKnown RBP17.49■□□□□ 0.39
USP39-201ENST00000323701 QRFPRQ96P65 431 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 ANAPC2Q9UJX6 822 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 VPS4AQ9UN37 437 aa17.49■□□□□ 0.39
USP39-201ENST00000323701 MRPS2Q9Y399 296 aaKnown RBP17.49■□□□□ 0.39
USP39-201ENST00000323701 TP53BP1Q12888 1972 aaPredicted RBP17.48■□□□□ 0.39
USP39-201ENST00000323701 PCDH15Q96QU1 1955 aa17.48■□□□□ 0.39
USP39-201ENST00000323701 PGRMC2O15173 223 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms