RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 EPYCQ99645 322 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 LMAN2LQ9H0V9 348 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 A0A1W2PQ45 241 aaPredicted RBP14.16□□□□□ -0.14
TCOF1-201ENST00000323668 A0A1W2PQY0 241 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 OR10H2O60403 315 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 AOC2O75106 756 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 IL3P08700 152 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 C21orf33P30042 268 aaPredicted RBP14.16□□□□□ -0.14
TCOF1-201ENST00000323668 HNRNPA0Q13151 305 aaKnown RBP14.16□□□□□ -0.14
TCOF1-201ENST00000323668 RNASE12Q5GAN4 147 aaKnown RBP14.16□□□□□ -0.14
TCOF1-201ENST00000323668 CBLL1Q75N03 491 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 FAM86B1Q8N7N1 296 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 ZBTB20Q9HC78 741 aaPredicted RBP14.16□□□□□ -0.14
TCOF1-201ENST00000323668 SRRDQ9UH36 339 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 GJD2Q9UKL4 321 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 ENPP4Q9Y6X5 453 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 SMIM30A4D0T7 59 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 E7EQ34 232 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 LEFTY1O75610 366 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 MPIP34949 423 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 PIGAP37287 484 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 TBRG1Q3YBR2 411 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 MFSD4BQ5TF39 518 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 AFMIDQ63HM1 303 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 PRR23CQ6ZRP0 262 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 TRAM1L1Q8N609 369 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 OR7G3Q8NG95 312 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 OR10H4Q8NGA5 316 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 SLC7A5P2Q9GIP4 190 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 SMG9Q9H0W8 520 aaKnown RBP14.16□□□□□ -0.14
TCOF1-201ENST00000323668 TMEM27Q9HBJ8 222 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 KLHL42Q9P2K6 505 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 HTR3EA5X5Y0 456 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 RIIAD1A6NNX1 92 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 SLC16A6O15403 523 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 CAPN5O15484 640 aaPredicted RBP14.16□□□□□ -0.14
TCOF1-201ENST00000323668 UGDHO60701 494 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 SLC16A8O95907 504 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 RCVRNP35243 200 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 GGT2P36268 569 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 SUZ12Q15022 739 aaKnown RBP14.16□□□□□ -0.14
TCOF1-201ENST00000323668 RPL3LQ92901 407 aaKnown RBP14.16□□□□□ -0.14
TCOF1-201ENST00000323668 KATNBL1Q9H079 304 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 OR51V1Q9H2C8 321 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 WDR70Q9NW82 654 aa14.16□□□□□ -0.14
TCOF1-201ENST00000323668 AGAP5A6NIR3 686 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 A8MV72 311 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-201ENST00000323668 CACNB4O00305 520 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-201ENST00000323668 CCR7P32248 378 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 CNR2P34972 360 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 CDH11P55287 796 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 EIF4HQ15056 248 aaKnown RBP14.15□□□□□ -0.14
TCOF1-201ENST00000323668 TRIM71Q2Q1W2 868 aaKnown RBP14.15□□□□□ -0.14
TCOF1-201ENST00000323668 SYCE2Q6PIF2 218 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 FAM98AQ8NCA5 519 aaKnown RBP14.15□□□□□ -0.14
TCOF1-201ENST00000323668 SLAIN1Q8ND83 568 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 ING5Q8WYH8 240 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 OR5P2Q8WZ92 322 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 C12orf66Q96MD2 445 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 ZNF300Q96RE9 604 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-201ENST00000323668 RACGAP1Q9H0H5 632 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 TDP1Q9NUW8 608 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 AKAP7Q9P0M2 348 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-201ENST00000323668 FAAHO00519 579 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 NFATC1O95644 943 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 SKP1P63208 163 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 CSTF1Q05048 431 aaKnown RBP14.15□□□□□ -0.14
TCOF1-201ENST00000323668 MICAQ29983 383 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 TRIM46Q7Z4K8 759 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 TTLQ8NG68 377 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 RERGQ96A58 199 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-201ENST00000323668 MCUBQ9NWR8 336 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 BTNL2Q9UIR0 455 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 DAPL1A0PJW8 107 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 FAM170BA6NMN3 283 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 H7C0S8 307 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 PIM1P11309 404 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-201ENST00000323668 TBPL1P62380 186 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 LY6G5CQ5SRR4 150 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 HDDC2Q7Z4H3 204 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 RANBP3LQ86VV4 465 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-201ENST00000323668 WFIKKN2Q8TEU8 576 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 RBM38Q9H0Z9 239 aaKnown RBP14.15□□□□□ -0.14
TCOF1-201ENST00000323668 UTS2RQ9UKP6 389 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 GRIP1Q9Y3R0 1128 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 CFAP20Q9Y6A4 193 aaKnown RBP14.15□□□□□ -0.14
TCOF1-201ENST00000323668 SCN1AP35498 2009 aa14.15□□□□□ -0.14
TCOF1-201ENST00000323668 RAB36O95755 333 aa14.15□□□□□ -0.15
TCOF1-201ENST00000323668 CH25HO95992 272 aa14.15□□□□□ -0.15
TCOF1-201ENST00000323668 CD70P32970 193 aa14.15□□□□□ -0.15
TCOF1-201ENST00000323668 NKX2-5P52952 324 aaPredicted RBP14.15□□□□□ -0.15
TCOF1-201ENST00000323668 ATP12AP54707 1039 aa14.15□□□□□ -0.15
TCOF1-201ENST00000323668 GRHL2Q6ISB3 625 aa14.15□□□□□ -0.15
TCOF1-201ENST00000323668 OR9Q2Q8NGE9 314 aa14.15□□□□□ -0.15
TCOF1-201ENST00000323668 DNASE1L2Q92874 299 aa14.15□□□□□ -0.15
TCOF1-201ENST00000323668 CCDC32Q9BV29 185 aa14.15□□□□□ -0.15
TCOF1-201ENST00000323668 TRMT61BQ9BVS5 477 aaKnown RBP14.15□□□□□ -0.15
TCOF1-201ENST00000323668 OR51E2Q9H255 320 aa14.15□□□□□ -0.15
TCOF1-201ENST00000323668 ATAD5Q96QE3 1844 aa14.14□□□□□ -0.15
TCOF1-201ENST00000323668 PRAMEF33A0A0G2JMD5 474 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms