RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 FRG1Q14331 258 aaKnown RBP13.27□□□□□ -0.29
RPP40-201ENST00000319533 PPP1R3AQ16821 1122 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 TEDDM1Q5T9Z0 273 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 TMEM211Q6ICI0 200 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 SBSNQ6UWP8 590 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 MEX3BQ6ZN04 569 aaKnown RBP13.27□□□□□ -0.29
RPP40-201ENST00000319533 ZBED8Q8IZ13 594 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 CA13Q8N1Q1 262 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 B3GNT7Q8NFL0 401 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 AICDAQ9GZX7 198 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 KLHL31Q9H511 634 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 PLAC1Q9HBJ0 212 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 CORO1CQ9ULV4 474 aaPredicted RBP13.27□□□□□ -0.29
RPP40-201ENST00000319533 VWA7Q9Y334 891 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 CLDN16Q9Y5I7 305 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 NF1P21359 2839 aa13.27□□□□□ -0.29
RPP40-201ENST00000319533 C4orf51C9J302 202 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 PSMD12O00232 456 aaPredicted RBP13.26□□□□□ -0.29
RPP40-201ENST00000319533 TFECO14948 347 aaPredicted RBP13.26□□□□□ -0.29
RPP40-201ENST00000319533 TP73O15350 636 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 CLCN2P51788 898 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 RAB8AP61006 207 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 CAV1Q03135 178 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 TFF3Q07654 80 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 MGAT5Q09328 741 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 TRMT10BQ6PF06 316 aaKnown RBP13.26□□□□□ -0.29
RPP40-201ENST00000319533 NXPE4Q6UWF7 544 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 ZNF572Q7Z3I7 529 aaPredicted RBP13.26□□□□□ -0.29
RPP40-201ENST00000319533 CD163Q86VB7 1156 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 THOC6Q86W42 341 aaKnown RBP13.26□□□□□ -0.29
RPP40-201ENST00000319533 SCUBE1Q8IWY4 988 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 GPATCH11Q8N954 259 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 ARMC2Q8NEN0 867 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 LILRB4Q8NHJ6 448 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 PYROXD1Q8WU10 500 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 ASB5Q8WWX0 329 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 ANKRD7Q92527 254 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 SPG11Q96JI7 2443 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 AIF1LQ9BQI0 150 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 WDR83Q9BRX9 315 aaKnown RBP13.26□□□□□ -0.29
RPP40-201ENST00000319533 NSMCE4AQ9NXX6 385 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 ZNF223Q9UK11 482 aaPredicted RBP13.26□□□□□ -0.29
RPP40-201ENST00000319533 IKZF3Q9UKT9 509 aa13.26□□□□□ -0.29
RPP40-201ENST00000319533 TRBV11-1A0A0K0K1C0 115 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 PABPN1LA6NDY0 278 aaKnown RBP13.25□□□□□ -0.29
RPP40-201ENST00000319533 EIF3HO15372 352 aaKnown RBP eCLIP13.25□□□□□ -0.29
RPP40-201ENST00000319533 HS6ST1O60243 411 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 ITGA10O75578 1167 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 GUCA1CO95843 209 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 TPOP07202 933 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 CHRNB4P30926 498 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 HNF4AP41235 474 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 PGGT1BP53609 377 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 FASTKD3Q14CZ7 662 aaKnown RBP13.25□□□□□ -0.29
RPP40-201ENST00000319533 WHAMMP3Q1A5X7 153 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 HECTD2Q5U5R9 776 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 FAM45BPQ6NSW5 357 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 MDGA2Q7Z553 956 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 GPALPP1Q8IXQ4 340 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 KLHDC8AQ8IYD2 350 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 CYP4Z2PQ8N1L4 340 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 FAM45AQ8TCE6 357 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 TSNARE1Q96NA8 513 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 NPLQ9BXD5 320 aaPredicted RBP13.25□□□□□ -0.29
RPP40-201ENST00000319533 TP63Q9H3D4 680 aaPredicted RBP13.25□□□□□ -0.29
RPP40-201ENST00000319533 SAYSD1Q9NPB0 183 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 NPDC1Q9NQX5 325 aaPredicted RBP13.25□□□□□ -0.29
RPP40-201ENST00000319533 SLC17A6Q9P2U8 582 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 DYRK1BQ9Y463 629 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 KCNE2Q9Y6J6 123 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 HCFC1P51610 2035 aa13.25□□□□□ -0.29
RPP40-201ENST00000319533 TMEM200CA6NKL6 621 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 A8MUA0 341 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 FOXO6A8MYZ6 492 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 MYO1DO94832 1006 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 TOXO94900 526 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 RFC3P40938 356 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 PLTPP55058 493 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 HSD17B7P56937 341 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 CDKL1Q00532 357 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 ILF2Q12905 390 aaKnown RBP13.24□□□□□ -0.29
RPP40-201ENST00000319533 CBLBQ13191 982 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 EMC4Q5J8M3 183 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 C8orf74Q6P047 294 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 ARHGAP11AQ6P4F7 1023 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 CAPN12Q6ZSI9 719 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 TMEM156Q8N614 296 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 CDKL2Q92772 493 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 GAL3ST3Q96A11 431 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 VMP1Q96GC9 406 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 TIMMDC1Q9NPL8 285 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 MOCS1Q9NZB8 636 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 TNFRSF10DQ9UBN6 386 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 RNF6Q9Y252 685 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 SLC22A14Q9Y267 594 aa13.24□□□□□ -0.29
RPP40-201ENST00000319533 YARS2Q9Y2Z4 477 aaKnown RBP13.24□□□□□ -0.29
RPP40-201ENST00000319533 SYNDIG1LA6NDD5 238 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 TGFBR3LH3BV60 316 aa13.23□□□□□ -0.29
RPP40-201ENST00000319533 ZNF37AP17032 561 aaPredicted RBP13.23□□□□□ -0.29
RPP40-201ENST00000319533 MSX1P28360 303 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms