RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 DACH2Q96NX9 599 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 HDAC8Q9BY41 377 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 SLC6A16Q9GZN6 736 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 PELI2Q9HAT8 420 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 TESMINQ9Y4I5 508 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 MAN1A2O60476 641 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 FADS2O95864 444 aaKnown RBP13.17□□□□□ -0.3
ATG4C-201ENST00000317868 TNFRSF1BP20333 461 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 LIMK1P53667 647 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 ZNF234Q14588 700 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 ARHGAP19Q14CB8 494 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 IER5LQ5T953 404 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 TMIGD1Q6UXZ0 262 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 Q6ZPB1 254 aaPredicted RBP13.17□□□□□ -0.3
ATG4C-201ENST00000317868 ZNF554Q86TJ5 538 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 DCUN1D3Q8IWE4 304 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 SFTPA1Q8IWL2 248 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 MIPOL1Q8TD10 442 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 GEMIN6Q8WXD5 167 aaKnown RBP13.17□□□□□ -0.3
ATG4C-201ENST00000317868 FCGR1BQ92637 280 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 NIPSNAP1Q9BPW8 284 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 ALOXE3Q9BYJ1 711 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 ACER3Q9NUN7 267 aa13.17□□□□□ -0.3
ATG4C-201ENST00000317868 WBP11Q9Y2W2 641 aaKnown RBP13.17□□□□□ -0.3
ATG4C-201ENST00000317868 MRPS23Q9Y3D9 190 aaKnown RBP13.17□□□□□ -0.3
ATG4C-201ENST00000317868 PRAMEF33A0A0G2JMD5 474 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 PLPP1O14494 284 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 PRAMEF10O60809 474 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 ITGA2P17301 1181 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 UQCRC2P22695 453 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 KELP23276 732 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 ST13P50502 369 aaKnown RBP13.16□□□□□ -0.3
ATG4C-201ENST00000317868 NR1D2Q14995 579 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 CYP2A13Q16696 494 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 FNDC3BQ53EP0 1204 aaKnown RBP13.16□□□□□ -0.3
ATG4C-201ENST00000317868 ZNF697Q5TEC3 545 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 SAXO2Q658L1 398 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 MMP21Q8N119 569 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 MFSD4AQ8N468 514 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 DNAJC22Q8N4W6 341 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 PLA2G15Q8NCC3 412 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 OR5AR1Q8NGP9 310 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 SPPL2AQ8TCT8 520 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 RAD51AP1Q96B01 352 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 PDXPQ96GD0 296 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 KCNC2Q96PR1 638 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 TMEM121BQ9BXQ6 578 aaPredicted RBP13.16□□□□□ -0.3
ATG4C-201ENST00000317868 MS4A8Q9BY19 250 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 RASSF1Q9NS23 344 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 ZNF226Q9NYT6 803 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 ZNF451Q9Y4E5 1061 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 SNRNP200O75643 2136 aaKnown RBP13.16□□□□□ -0.3
ATG4C-201ENST00000317868 A0A1W2PRB8 838 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 HEPACAM2A8MVW5 462 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 CLDN25C9JDP6 229 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 CBLP22681 906 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 BSGP35613 385 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 ZNF846Q147U1 533 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 EXOC3L2Q2M3D2 409 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 TMEM240Q5SV17 173 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 ZNF770Q6IQ21 691 aaPredicted RBP13.16□□□□□ -0.3
ATG4C-201ENST00000317868 ZBTB46Q86UZ6 589 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 CENPSQ8N2Z9 138 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 ANKRD53Q8N9V6 530 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 OR5K2Q8NHB8 316 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 IL17FQ96PD4 163 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 RSPO3Q9BXY4 272 aaPredicted RBP13.16□□□□□ -0.3
ATG4C-201ENST00000317868 CXorf36Q9H7Y0 433 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 SLAMF7Q9NQ25 335 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 LHX9Q9NQ69 397 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 OSGIN1Q9UJX0 560 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 HCN2Q9UL51 889 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 DSPPQ9NZW4 1301 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 NINQ8N4C6 2090 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 LINC01553A4QN01 128 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 KRT75O95678 551 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 DDCP20711 480 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 GRK3P35626 688 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 SLC19A1P41440 591 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 VIPR2P41587 438 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 CASP9P55211 416 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 SLCO6A1Q86UG4 719 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 ARMC8Q8IUR7 673 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 ARMC5Q96C12 935 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 NEURL3Q96EH8 262 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 PIP5K1AQ99755 562 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 SORBS1Q9BX66 1292 aaKnown RBP13.16□□□□□ -0.3
ATG4C-201ENST00000317868 WDR12Q9GZL7 423 aaKnown RBP13.16□□□□□ -0.3
ATG4C-201ENST00000317868 SLIRPQ9GZT3 109 aaKnown RBP13.16□□□□□ -0.3
ATG4C-201ENST00000317868 RUBCNLQ9H714 662 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 NT5DC2Q9H857 520 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 RHBDL2Q9NX52 303 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 RWDD3Q9Y3V2 267 aa13.16□□□□□ -0.3
ATG4C-201ENST00000317868 NUMA1Q14980 2115 aa13.15□□□□□ -0.3
ATG4C-201ENST00000317868 A0A1W2PPV9 198 aa13.15□□□□□ -0.3
ATG4C-201ENST00000317868 M0R082 166 aa13.15□□□□□ -0.3
ATG4C-201ENST00000317868 VIPP01282 170 aa13.15□□□□□ -0.3
ATG4C-201ENST00000317868 LCKP06239 509 aa13.15□□□□□ -0.3
ATG4C-201ENST00000317868 CDK1P06493 297 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms