RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 C3P1Q6ZMU1 363 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 RALGPS2Q86X27 583 aaPredicted RBP4.36□□□□□ -1.71
CNOT1-201ENST00000317147 LGI4Q8N135 537 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 OR7G2Q8NG99 324 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 NEIL3Q8TAT5 605 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 SLC16A10Q8TF71 515 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 TTYH2Q9BSA4 534 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 C1QTNF7Q9BXJ2 289 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 QRSL1Q9H0R6 528 aaKnown RBP4.36□□□□□ -1.71
CNOT1-201ENST00000317147 RBM38Q9H0Z9 239 aaKnown RBP4.36□□□□□ -1.71
CNOT1-201ENST00000317147 AKIP1Q9NQ31 210 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 SLCO3A1Q9UIG8 710 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 TTC24A2A3L6 582 aaPredicted RBP4.36□□□□□ -1.71
CNOT1-201ENST00000317147 CDK1P06493 297 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 SLURP2P0DP57 97 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 PKMP14618 531 aaKnown RBP4.36□□□□□ -1.71
CNOT1-201ENST00000317147 GABRA5P31644 462 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 CDH8P55286 799 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 GALNT2Q10471 571 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 AIMP2Q13155 320 aaKnown RBP4.36□□□□□ -1.71
CNOT1-201ENST00000317147 CEACAM7Q14002 265 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 SPHARQ15513 63 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 FCRLBQ6BAA4 426 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 ARMC6Q6NXE6 501 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 OR8K3Q8NH51 312 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 OR10A6Q8NH74 314 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 C2orf15Q8WU43 125 aaKnown RBP4.36□□□□□ -1.71
CNOT1-201ENST00000317147 BTN2A2Q8WVV5 523 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 DCPSQ96C86 337 aaKnown RBP4.36□□□□□ -1.71
CNOT1-201ENST00000317147 PHYHIPLQ96FC7 376 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 PITHD1Q9GZP4 211 aaPredicted RBP4.36□□□□□ -1.71
CNOT1-201ENST00000317147 BCAS3Q9H6U6 928 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 MOSPD1Q9UJG1 213 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 TMEM14AQ9Y6G1 99 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 DSCAMO60469 2012 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 HIVEP3Q5T1R4 2406 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 A0A1W2PPL8 197 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 ACOT7O00154 380 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 CASC3O15234 703 aaKnown RBP4.36□□□□□ -1.71
CNOT1-201ENST00000317147 SHOXO15266 292 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 FLRT2O43155 660 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 GRIN3BO60391 1043 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 EGFP01133 1207 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 IFNA10P01566 189 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 ZDHHC11BP0C7U3 371 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 CYP4B1P13584 511 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 CD247P20963 164 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 BDH1Q02338 343 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 CAMK2DQ13557 499 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 PPP1R3AQ16821 1122 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 ZBTB37Q5TC79 503 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 OTUD1Q5VV17 481 aaPredicted RBP4.36□□□□□ -1.71
CNOT1-201ENST00000317147 RAB12Q6IQ22 244 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 DPY19L2P1Q6NXN4 242 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 ZNF783Q6ZMS7 281 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 ACOT1Q86TX2 421 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 CD163Q86VB7 1156 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 CILP2Q8IUL8 1156 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 PIAS4Q8N2W9 510 aaPredicted RBP4.36□□□□□ -1.71
CNOT1-201ENST00000317147 OR1M1Q8NGA1 313 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 ASB12Q8WXK4 309 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 GTF2H4Q92759 462 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 HSH2DQ96JZ2 352 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 LMAN2LQ9H0V9 348 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 ATXN3LQ9H3M9 355 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 LIN28AQ9H9Z2 209 aaKnown RBP4.36□□□□□ -1.71
CNOT1-201ENST00000317147 ENAMQ9NRM1 1142 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 DCAF13Q9NV06 445 aaKnown RBP4.36□□□□□ -1.71
CNOT1-201ENST00000317147 ABRACLQ9P1F3 81 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 PCDHB11Q9Y5F2 797 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 SOCS2O14508 198 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 PIP5K1BO14986 540 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 LCMT2O60294 686 aaKnown RBP4.36□□□□□ -1.71
CNOT1-201ENST00000317147 CLDN11O75508 207 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 UBL3O95164 117 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 KAT7O95251 611 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 RAB40ALP0C0E4 278 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 LINC00032P0C843 101 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 PDHA2P29803 388 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 DSG3P32926 999 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 GGT2P36268 569 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 PCDH1Q08174 1060 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 SIM2Q14190 667 aaPredicted RBP4.36□□□□□ -1.71
CNOT1-201ENST00000317147 Q3C1V9 767 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 LDLRAP1Q5SW96 308 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 AVPI1Q5T686 147 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 HBMQ6B0K9 141 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 EFCAB12Q6NXP0 572 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 PRSS55Q6UWB4 352 aaPredicted RBP4.36□□□□□ -1.71
CNOT1-201ENST00000317147 WDR88Q6ZMY6 472 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 MFSD6LQ8IWD5 586 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 SLC35F3Q8IY50 421 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 PARP16Q8N5Y8 322 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 LHFPL5Q8TAF8 219 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 RAB40AQ8WXH6 277 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 NACC2Q96BF6 587 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 FBXL20Q96IG2 436 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 LURAP1Q96LR2 239 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 DMRTB1Q96MA1 342 aa4.36□□□□□ -1.71
CNOT1-201ENST00000317147 SORT1Q99523 831 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms