RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 TRBV5-4A0A0C4DH59 114 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 LOC105371267A0A1B0GV96 52 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 AP3D1O14617 1153 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 PLA2G10O15496 165 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 GALP22466 123 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 ALDH6A1Q02252 535 aaKnown RBP4.59□□□□□ -1.67
PTPN13-201ENST00000316707 HEPACAMQ14CZ8 416 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 PRICKLE2Q7Z3G6 844 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 NXPE1Q8N323 547 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 OR10Q1Q8NGQ4 319 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 SH3KBP1Q96B97 665 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 INPP5KQ9BT40 448 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF275Q9NSD4 429 aaPredicted RBP4.59□□□□□ -1.67
PTPN13-201ENST00000316707 SLC6A13Q9NSD5 602 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 RNF19AQ9NV58 838 aa4.59□□□□□ -1.67
PTPN13-201ENST00000316707 FNDC3AQ9Y2H6 1198 aaKnown RBP4.59□□□□□ -1.67
PTPN13-201ENST00000316707 LSM2Q9Y333 95 aaKnown RBP4.59□□□□□ -1.67
PTPN13-201ENST00000316707 TRDV1A0A1B0GX56 115 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 CARNS1A5YM72 827 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 CSF2P04141 144 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 ANXA4P09525 319 aaPredicted RBP4.59□□□□□ -1.68
PTPN13-201ENST00000316707 GDF5P43026 501 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 DGKGP49619 791 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 CHIT1Q13231 466 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 SOWAHCQ53LP3 525 aaPredicted RBP4.59□□□□□ -1.68
PTPN13-201ENST00000316707 SPIN4Q56A73 249 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 TOR2AQ5JU69 321 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 ASPGQ86U10 573 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 LAX1Q8IWV1 398 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 TRPV1Q8NER1 839 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 GOT1L1Q8NHS2 421 aaPredicted RBP4.59□□□□□ -1.68
PTPN13-201ENST00000316707 UFD1Q92890 307 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 COQ8BQ96D53 544 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 PPP1R16AQ96I34 528 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 FCRL1Q96LA6 429 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 OR2M2Q96R28 347 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 FZD3Q9NPG1 666 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 MCUBQ9NWR8 336 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 NLKQ9UBE8 527 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 HCN2Q9UL51 889 aa4.59□□□□□ -1.68
PTPN13-201ENST00000316707 TRBC2A0A5B9 178 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 STK25O00506 426 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SSX4O60224 188 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ENTPD6O75354 484 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 OR7A10O76100 309 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 WDPCPO95876 746 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CNR2P34972 360 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 XCR1P46094 333 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 UGT8Q16880 541 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CRB2Q5IJ48 1285 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 LRRTM3Q86VH5 581 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 PM20D2Q8IYS1 436 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SLC37A3Q8NCC5 494 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CLIP3Q96DZ5 547 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 TMEM43Q9BTV4 400 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 KCNN2Q9H2S1 579 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 PPP1R3EQ9H7J1 279 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ELP3Q9H9T3 547 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 FAM8A1Q9UBU6 413 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 FTSJ1Q9UET6 329 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 PPT2Q9UMR5 302 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SPIN1Q9Y657 262 aaPredicted RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CSNK1G3Q9Y6M4 447 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 C7orf66A4D0T2 115 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 A8MV72 311 aaPredicted RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CASKO14936 926 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 PDYNP01213 254 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 LHCGRP22888 699 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 GPC1P35052 558 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CRATP43155 626 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SLC6A12P48065 614 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 GPR15P49685 360 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 WNT4P56705 351 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 WDR5P61964 334 aaKnown RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 MRPS6P82932 125 aaKnown RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 TWF1Q12792 350 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 HNRNPA0Q13151 305 aaKnown RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 NFATC2Q13469 925 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 DCST1Q5T197 706 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF551Q7Z340 670 aaPredicted RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 LAS2Q8IYD9 372 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 GPR65Q8IYL9 337 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ADGRF3Q8IZF5 1079 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 TMEM145Q8NBT3 493 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF431Q8TF32 576 aaPredicted RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 PHF21AQ96BD5 680 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 CD93Q9NPY3 652 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 TXNL4BQ9NX01 149 aaKnown RBP4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SRRDQ9UH36 339 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 KCND3Q9UK17 655 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 H3BM21 787 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 H3BN98 237 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 TLR5O60602 858 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 PEX10O60683 326 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 TGM6O95932 706 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 IGLV3-27P01718 113 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 PRSS56P0CW18 603 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 LAMP1P11279 417 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 MAN2A2P49641 1150 aa4.58□□□□□ -1.68
PTPN13-201ENST00000316707 SLC39A12Q504Y0 691 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms