RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 LIN28AQ9H9Z2 209 aaKnown RBP16.27■□□□□ 0.2
EXOSC4-201ENST00000316052 MOCS1Q9NZB8 636 aa16.27■□□□□ 0.2
EXOSC4-201ENST00000316052 FBXW2Q9UKT8 454 aa16.27■□□□□ 0.2
EXOSC4-201ENST00000316052 PPT2Q9UMR5 302 aa16.27■□□□□ 0.2
EXOSC4-201ENST00000316052 TMEM200CA6NKL6 621 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 KLRC4-KLRK1H3BQV0 150 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 TFECO14948 347 aaPredicted RBP16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 ERI3O43414 337 aaKnown RBP16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 PRAMEF4O60810 478 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 H2AFYO75367 372 aaKnown RBP16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 PIAS1O75925 651 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 WDR47O94967 919 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 GNAZP19086 355 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 SSTR2P30874 369 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 PTGS2P35354 604 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 HNMTP50135 292 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 GPR85P60893 370 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 STXBP1P61764 594 aaKnown RBP16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 TERF2Q15554 542 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 PRAMEF9Q5VWM5 478 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 TMIGD1Q6UXZ0 262 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 VN1R5Q7Z5H4 357 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 CYP4Z2PQ8N1L4 340 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 TMEM156Q8N614 296 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 ZFP62Q8NB50 900 aaPredicted RBP16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 FAM57AQ8TBR7 257 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 SDCCAG3Q96C92 435 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 FAR2Q96K12 515 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 QRFPRQ96P65 431 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 MCMBPQ9BTE3 642 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 NPLQ9BXD5 320 aaPredicted RBP16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 ENKD1Q9H0I2 346 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 PRTFDC1Q9NRG1 225 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 TRMT1Q9NXH9 659 aaKnown RBP16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 CTNNAL1Q9UBT7 734 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 ITGB1BP2Q9UKP3 347 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 HCFC1P51610 2035 aa16.26■□□□□ 0.19
EXOSC4-201ENST00000316052 PHF3Q92576 2039 aaKnown RBP16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 TAPBPO15533 448 aa16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 SEC31AO94979 1220 aaKnown RBP16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 TFEBP19484 476 aa16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 ARL4CP56559 192 aa16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 HSD17B7P56937 341 aa16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 DR1Q01658 176 aa16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 SLBPQ14493 270 aaKnown RBP eCLIP16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 XKR6Q5GH73 641 aa16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 ADNP2Q6IQ32 1131 aa16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 SYDE1Q6ZW31 735 aaPredicted RBP16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 CD163Q86VB7 1156 aa16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 SPATA6LQ8N4H0 392 aa16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 FBXO36Q8NEA4 188 aa16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 OR52N2Q8NGI0 321 aa16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 CCT6BQ92526 530 aa16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 VMP1Q96GC9 406 aa16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 CAPZA3Q96KX2 299 aa16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 SMYD2Q9NRG4 433 aa16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 DEPPQ9NTK1 212 aa16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 KCMF1Q9P0J7 381 aa16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 ZNF490Q9ULM2 529 aaPredicted RBP16.25■□□□□ 0.19
EXOSC4-201ENST00000316052 MYOCOSA0A1B0GUC4 107 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 PINLYPA6NC86 204 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 NCF1BA6NI72 391 aaPredicted RBP16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 NCF1CA8MVU1 366 aaPredicted RBP16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 CYR61O00622 381 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 B3GALT2O43825 422 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 CDC40O60508 579 aaKnown RBP eCLIP16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 PDE9AO76083 593 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 WISP3O95389 354 aaPredicted RBP16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 TPOP07202 933 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 NCF1P14598 390 aaPredicted RBP16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 TCP1P17987 556 aaKnown RBP16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 PLA2G16P53816 162 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 RAB38P57729 211 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 PDIA2Q13087 525 aaKnown RBP16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 SLC13A2Q13183 592 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 ADPRMQ3LIE5 342 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 FBXO48Q5FWF7 155 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 CLNKQ7Z7G1 428 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 ADAMTSL2Q86TH1 951 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 CREG2Q8IUH2 290 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 FAM47BQ8NA70 645 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 TTLQ8NG68 377 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 CA5BP1Q8WTZ4 195 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 SREK1Q8WXA9 508 aaKnown RBP16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 CSF3RQ99062 836 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 TMEM79Q9BSE2 394 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 TRIM31Q9BZY9 425 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 NT5DC2Q9H857 520 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 PLSCR2Q9NRY7 297 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 MTO1Q9Y2Z2 717 aaKnown RBP16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 YARS2Q9Y2Z4 477 aaKnown RBP16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 AKAP6Q13023 2319 aa16.24■□□□□ 0.19
EXOSC4-201ENST00000316052 E7ESA3 106 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 CLDN4O14493 209 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 ZSCAN12O43309 604 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 CLEC3AO75596 197 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 OR2J2O76002 312 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 ZFAND5O76080 213 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 CERS1P27544 350 aa16.23■□□□□ 0.19
EXOSC4-201ENST00000316052 SSR4P51571 173 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms