RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 GPR17Q13304 367 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 PPM1JQ5JR12 505 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 TMIGD1Q6UXZ0 262 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF566Q969W8 418 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 CMTM3Q96MX0 182 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 C1QTNF3Q9BXJ4 246 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 TMEM39AQ9NV64 488 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 SULT1C2O00338 296 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 TP53P04637 393 aaPredicted RBP8.5□□□□□ -1.05
COL6A5-202ENST00000312481 CSF2RAP15509 400 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 HK1P19367 917 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 RAB5BP61020 215 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 AGAP7PQ5VUJ5 663 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 OR9A1PQ8NGU1 263 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 BTBD2Q9BX70 525 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 A0A1W2PPW3 197 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 HSPA12AO43301 675 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 CDK14O94921 469 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 CD1DP15813 335 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 TNNI3P19429 210 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 MLLT3P42568 568 aaPredicted RBP8.5□□□□□ -1.05
COL6A5-202ENST00000312481 HTR3AP46098 478 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 SLC10A7Q0GE19 358 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 TCEAL6Q6IPX3 200 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 PLPP6Q8IY26 295 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 BCL7CQ8WUZ0 217 aaPredicted RBP8.5□□□□□ -1.05
COL6A5-202ENST00000312481 EBF4Q9BQW3 602 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF559Q9BR84 538 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 EPHX3Q9H6B9 360 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 SARDHQ9UL12 918 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 SLC22A7Q9Y694 548 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 HLA-DQA2P01906 255 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 SHMT2P34897 504 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 PDX1P52945 283 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 PPIGQ13427 754 aaKnown RBP eCLIP8.5□□□□□ -1.05
COL6A5-202ENST00000312481 SEZ6Q53EL9 994 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 FAM205BPQ63HN1 556 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 SCIMPQ6UWF3 145 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 SAMD7Q7Z3H4 446 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 ACBD7Q8N6N7 88 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 TBC1D20Q96BZ9 403 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 SLC4A9Q96Q91 983 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 EIF2B4Q9UI10 523 aaKnown RBP8.5□□□□□ -1.05
COL6A5-202ENST00000312481 KCNIP3Q9Y2W7 256 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 SLC6A5Q9Y345 797 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 FKBP7Q9Y680 259 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 COL16A1Q07092 1604 aaPredicted RBP8.5□□□□□ -1.05
COL6A5-202ENST00000312481 S100A7P31151 101 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 CREB5Q02930 508 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 ST3GAL4Q11206 333 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 CDC20Q12834 499 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 NAE1Q13564 534 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 CCDC58Q4VC31 144 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 CPZQ66K79 652 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 RNF130Q86XS8 419 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 GPR135Q8IZ08 494 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 OR8H3Q8N146 312 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 NEIL3Q8TAT5 605 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 GPR151Q8TDV0 419 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 GPATCH2Q9NW75 528 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 C19orf25Q9UFG5 118 aaPredicted RBP8.5□□□□□ -1.05
COL6A5-202ENST00000312481 ABHD14A-ACY1A0A1B0GW23 586 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 CTSEP14091 401 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 ERFP50548 548 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 C1QTNF8P60827 252 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 MLLT1Q03111 559 aaPredicted RBP8.5□□□□□ -1.05
COL6A5-202ENST00000312481 ELAVL3Q14576 367 aaKnown RBP8.5□□□□□ -1.05
COL6A5-202ENST00000312481 GLT8D1Q68CQ7 371 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 GPR149Q86SP6 731 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 Q8N402 240 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 PROKR2Q8NFJ6 384 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 RNF31Q96EP0 1072 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 ABRACLQ9P1F3 81 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 HEATR5AQ86XA9 2040 aa8.5□□□□□ -1.05
COL6A5-202ENST00000312481 ENGP17813 658 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 HSPA7P48741 367 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 CLCN7P51798 805 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 MLLT11Q13015 90 aaPredicted RBP8.49□□□□□ -1.05
COL6A5-202ENST00000312481 FAM76BQ5HYJ3 339 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 OLFML2AQ68BL7 652 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 PLAG1Q6DJT9 500 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 CLEC6AQ6EIG7 209 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 ZNF614Q8N883 585 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 SHKBP1Q8TBC3 707 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 PIF1Q9H611 641 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 MRPS30Q9NP92 439 aaKnown RBP8.49□□□□□ -1.05
COL6A5-202ENST00000312481 B3GAT2Q9NPZ5 323 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.49□□□□□ -1.05
COL6A5-202ENST00000312481 CYTH4Q9UIA0 394 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 A0A075B6Q4 140 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 KDELR2P33947 212 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 DPY19L2P1Q6NXN4 242 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 PIWIL3Q7Z3Z3 882 aaKnown RBP8.49□□□□□ -1.05
COL6A5-202ENST00000312481 IL17RCQ8NAC3 791 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 AQP11Q8NBQ7 271 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 DNASE1L2Q92874 299 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 GXYLT2A0PJZ3 443 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 ACOT7O00154 380 aa8.49□□□□□ -1.05
COL6A5-202ENST00000312481 HNRNPA1P09651 372 aaKnown RBP eCLIP8.49□□□□□ -1.05
COL6A5-202ENST00000312481 NFATC2Q13469 925 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms