RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 ZNF592Q92610 1267 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 ZNF354BQ96LW1 612 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 SIGLEC12Q96PQ1 595 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 F2RL3Q96RI0 385 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 ZNF358Q9NW07 568 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 KCMF1Q9P0J7 381 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 ZNF223Q9UK11 482 aaPredicted RBP18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 DAPP1Q9UN19 280 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 PPIEQ9UNP9 301 aaKnown RBP18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 MMACHCQ9Y4U1 282 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 MYO7BQ6PIF6 2116 aa18.56■□□□□ 0.56
PDZRN3-202ENST00000308537 PCNX1Q96RV3 2341 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 CENPEQ02224 2701 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 CCDC189A1A4V9 331 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 ANKDD1BA6NHY2 528 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 SUPT3HB4E1H0 165 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 PRAMEF2O60811 474 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 SUPT3HO75486 399 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 SCELO95171 688 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 PPP2R1BP30154 601 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 PLA2G16P53816 162 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 LIM2P55344 173 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 SRSF11Q05519 484 aaKnown RBP18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 SETDB1Q15047 1291 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 TECRLQ5HYJ1 363 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 LGI4Q8N135 537 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 BCORP1Q8N888 145 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 CCT6BQ92526 530 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 NR4A3Q92570 626 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 FMO2Q99518 471 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 HES7Q9BYE0 225 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 TEKT2Q9UIF3 430 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 NOTCH2Q04721 2471 aa18.55■□□□□ 0.56
PDZRN3-202ENST00000308537 NEURL1O76050 574 aa18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 ACSL3O95573 720 aa18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 CTAGE8P0CG41 777 aa18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 MST1P26927 711 aa18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 CD96P40200 585 aa18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 ACTN3Q08043 901 aaPredicted RBP18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 LAPTM5Q13571 262 aa18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 ACAP2Q15057 778 aa18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 MEP1AQ16819 746 aa18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 GLE1Q53GS7 698 aaKnown RBP18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 FAM180AQ6UWF9 173 aa18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 CTAGE4Q8IX94 777 aa18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 RNF175Q8N4F7 328 aa18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 OR7G3Q8NG95 312 aa18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 SCMH1Q96GD3 660 aa18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 SERINC2Q96SA4 455 aa18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 OLAHQ9NV23 265 aa18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 OPTCQ9UBM4 332 aa18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 MTRF1LQ9UGC7 380 aaKnown RBP18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 PCDHGB6Q9Y5F9 930 aa18.54■□□□□ 0.56
PDZRN3-202ENST00000308537 PSMD12O00232 456 aaPredicted RBP18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 RTCAO00442 366 aaKnown RBP18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 B3GALT2O43825 422 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 S100BP04271 92 aaPredicted RBP18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 PHBP35232 272 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 MSH2P43246 934 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 SERPINB8P50452 374 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 MTTPP55157 894 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 HSD17B7P56937 341 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 PMP22Q01453 160 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 PCBP2Q15366 365 aaKnown RBP eCLIP18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 TERF2Q15554 542 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 UAP1Q16222 522 aaPredicted RBP18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 FAM83EQ2M2I3 478 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 PAGE2BQ5JRK9 111 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 HIST2H2BCQ6DN03 193 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 GRHL2Q6ISB3 625 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 TRIM40Q6P9F5 258 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 FAM47BQ8NA70 645 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 MNS1Q8NEH6 495 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 DCAKDQ8WVC6 231 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 FAR2Q96K12 515 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 MAGEB10Q96LZ2 347 aaPredicted RBP18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 PAFAH2Q99487 392 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 ZNF717Q9BY31 904 aaPredicted RBP18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 TRIM45Q9H8W5 580 aaPredicted RBP18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 ANKRD10Q9NXR5 420 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 ABI3Q9P2A4 366 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 TSC22D4Q9Y3Q8 395 aa18.53■□□□□ 0.56
PDZRN3-202ENST00000308537 GABRR3A8MPY1 467 aa18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 SIX3O95343 332 aaPredicted RBP18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 ATP5A1P25705 553 aaKnown RBP18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 GCAP28676 217 aa18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 TYK2P29597 1187 aa18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 ALDH18A1P54886 795 aaKnown RBP18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 MLF1P58340 268 aa18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 PFKFB4Q16877 469 aa18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 ZNF766Q5HY98 468 aa18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 SPINK14Q6IE38 97 aa18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 RPS19BP1Q86WX3 136 aaKnown RBP18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 ZNF595Q8IYB9 648 aa18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 TMEM151AQ8N4L1 468 aa18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 SLC5A8Q8N695 610 aa18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 TEX9Q8N6V9 391 aa18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 IFT81Q8WYA0 676 aa18.52■□□□□ 0.56
PDZRN3-202ENST00000308537 CDCP1Q9H5V8 836 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms