RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 S1PR5Q9H228 398 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 RPRD1BQ9NQG5 326 aaKnown RBP9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 SLC6A13Q9NSD5 602 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 CCDC59Q9P031 241 aaKnown RBP9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 PPIL1Q9Y3C6 166 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 OARD1Q9Y530 152 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 PCDHB1Q9Y5F3 818 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 NUP210Q8TEM1 1887 aaPredicted RBP9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 UPK3BL1B0FP48 263 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 UPK3BL2E5RIL1 263 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 H0YC42 278 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 H3BQ06 376 aaPredicted RBP9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 ERVH48-1M5A8F1 160 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 WBP4O75554 376 aaKnown RBP9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 DLGAP3O95886 979 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 APOA1P02647 267 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 LCKP06239 509 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 EPHX1P07099 455 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 CYP4B1P13584 511 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 GLULP15104 373 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 PTPN6P29350 595 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 LTBRP36941 435 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 SEC13P55735 322 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 CLDN8P56748 225 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 B4GALNT1Q00973 533 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 NUMA1Q14980 2115 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 SNAP47Q5SQN1 464 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 MLIPQ5VWP3 458 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 BRAT1Q6PJG6 821 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 MSANTD1Q6ZTZ1 278 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 FAM9CQ8IZT9 166 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 VPS37AQ8NEZ2 397 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 IL17RDQ8NFM7 739 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 PIK3R3Q92569 461 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 PROX1Q92786 737 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 USP7Q93009 1102 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 PYCR2Q96C36 320 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 GIMAP5Q96F15 307 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 TRAF4Q9BUZ4 470 aaPredicted RBP9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 NTMT1Q9BV86 223 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 PLCXD1Q9NUJ7 323 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 RYDENQ9NUL5 291 aaKnown RBP9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 ACOXLQ9NUZ1 547 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 A0A0C4DFX4 3053 aa9.91□□□□□ -0.82
APOBEC3F-201ENST00000308521 MYO10Q9HD67 2058 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 A0A1W2PQ72 361 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 PDZK1P1A8MUH7 402 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 MANBAO00462 879 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 TBX1O43435 398 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 AIREO43918 545 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 ULK1O75385 1050 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 KAT7O95251 611 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 GUCA1CO95843 209 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 SRPRAP08240 638 aaKnown RBP9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 EBLN1P0CF75 366 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 BCKDHAP12694 445 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 CSTF2P33240 577 aaKnown RBP eCLIP9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 S100A3P33764 101 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 CBX5P45973 191 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 TBCEQ15813 527 aaPredicted RBP9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 SMN1Q16637 294 aaKnown RBP9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 COLEC12Q5KU26 742 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 FAHD1Q6P587 224 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 TMEM184AQ6ZMB5 413 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 CERS6Q6ZMG9 384 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 SERPINA11Q86U17 422 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 LIX1LQ8IVB5 337 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 RBFAQ8N0V3 343 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 C10orf111Q8N326 155 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 AMER2Q8N7J2 671 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 ARRDC3Q96B67 414 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 RIOK2Q9BVS4 552 aaKnown RBP9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 SLC29A3Q9BZD2 475 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 CD244Q9BZW8 370 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 DDX28Q9NUL7 540 aaKnown RBP9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 AASSQ9UDR5 926 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 RPS6KA6Q9UK32 745 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 PNMA8BQ9ULN7 279 aaPredicted RBP9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 ABCG2Q9UNQ0 655 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 POLHQ9Y253 713 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 DOCK9Q9BZ29 2069 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 KRT87PA6NCN2 255 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 M0R082 166 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 FABP3P05413 133 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 PRPS2P11908 318 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 ETV6P41212 452 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 CTSKP43235 329 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 HSPA7P48741 367 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 ETV1P50549 477 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 RPS14P62263 151 aaKnown RBP9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 ELP6Q0PNE2 266 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 GTF2H3Q13889 308 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 PDGFRLQ15198 375 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 HNRNPA1L2Q32P51 320 aaKnown RBP9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 VN1R5Q7Z5H4 357 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 CCDC103Q8IW40 242 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 RGL4Q8IZJ4 473 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 TCAIMQ8N3R3 496 aa9.9□□□□□ -0.82
APOBEC3F-201ENST00000308521 WFIKKN2Q8TEU8 576 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms