RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 RHPN2P1A8MT19 583 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 TRIM38O00635 465 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 CAPN5O15484 640 aaPredicted RBP6.62□□□□□ -1.35
PTCD2-201ENST00000308077 ERI3O43414 337 aaKnown RBP6.62□□□□□ -1.35
PTCD2-201ENST00000308077 KIF1CO43896 1103 aaKnown RBP6.62□□□□□ -1.35
PTCD2-201ENST00000308077 DFNA5O60443 496 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 CIB2O75838 187 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 CTSBP07858 339 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 FURINP09958 794 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 TCN1P20061 433 aaPredicted RBP6.62□□□□□ -1.35
PTCD2-201ENST00000308077 EFNA1P20827 205 aaPredicted RBP6.62□□□□□ -1.35
PTCD2-201ENST00000308077 PTPN6P29350 595 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 CNR2P34972 360 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 HPCAL1P37235 193 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 SSR2P43308 183 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 SRSF11Q05519 484 aaKnown RBP6.62□□□□□ -1.35
PTCD2-201ENST00000308077 C2orf80Q0P641 193 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 BIRC2Q13490 618 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 RIPK1Q13546 671 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 DUOXA1Q1HG43 343 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 MPEG1Q2M385 716 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 C6orf10Q5SRN2 563 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 C1orf146Q5VVC0 180 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 NKAIN2Q5VXU1 208 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 NANOGP8Q6NSW7 305 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 ARMC6Q6NXE6 501 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 IRGCQ6NXR0 463 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 PRMT9Q6P2P2 845 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 ABHD17CQ6PCB6 329 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 PAGE2Q7Z2X7 111 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 GPR180Q86V85 440 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 CLECL1Q8IZS7 167 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 TMEM132CQ8N3T6 1108 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 C19orf47Q8N9M1 422 aaKnown RBP6.62□□□□□ -1.35
PTCD2-201ENST00000308077 OR2L5Q8NG80 312 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 MIEF2Q96C03 454 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 COQ8BQ96D53 544 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 MAP3K3Q99759 626 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 ZFYVE21Q9BQ24 234 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 DUSP26Q9BV47 211 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 SEMA6CQ9H3T2 930 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 REEP4Q9H6H4 257 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 NANOGQ9H9S0 305 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 NLGN3Q9NZ94 848 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 ADAM29Q9UKF5 820 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 U3KQA8 63 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 SCN3AQ9NY46 2000 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 LAMA1P25391 3075 aa6.62□□□□□ -1.35
PTCD2-201ENST00000308077 DMXL1Q9Y485 3027 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 GOLGA4Q13439 2230 aaKnown RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 MYO15AQ9UKN7 3530 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 IGHV1OR21-1A0A087WYE8 117 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 A0A096LPI6 279 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 SLC9B1P1A6NJY1 282 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 H0YGG7 62 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 SLC30A4O14863 429 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 NUDT21O43809 227 aaKnown RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 KCNH1O95259 989 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 NPPAP01160 153 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 C1QCP02747 245 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 ZNF888P0CJ79 500 aaPredicted RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 CDH3P22223 829 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 ME2P23368 584 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 ATP5A1P25705 553 aaKnown RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 CERS1P27544 350 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 ALDH4A1P30038 563 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 HOXD12P35452 270 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 MAPK12P53778 367 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 EPHA4P54764 986 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 OR1D5P58170 312 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 MTPNP58546 118 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 RAB8AP61006 207 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 ACTR3P61158 418 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 ARF3P61204 181 aaPredicted RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 CFHR1Q03591 330 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 RELAQ04206 551 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 KLC1Q07866 573 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 CCNIQ14094 377 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 NR1D2Q14995 579 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 DEFB110Q30KQ9 67 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 LRIF1Q5T3J3 769 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 CPTPQ5TA50 214 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 MRM1Q6IN84 353 aaKnown RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 KLHL35Q6PF15 583 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 FAM92BQ6ZTR7 304 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 MSANTD1Q6ZTZ1 278 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 IKBIPQ70UQ0 350 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 OR8K5Q8NH50 307 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 UTP15Q8TED0 518 aaKnown RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 STARD8Q92502 1023 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 UCN3Q969E3 161 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 THAP11Q96EK4 314 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 QRFPRQ96P65 431 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 CENPKQ9BS16 269 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 PCDHAC1Q9H158 963 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 SMOC1Q9H4F8 434 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 IKZF5Q9H5V7 419 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 GAREM1Q9H706 876 aa6.61□□□□□ -1.35
PTCD2-201ENST00000308077 FAM120CQ9NX05 1096 aaKnown RBP6.61□□□□□ -1.35
PTCD2-201ENST00000308077 TEX10Q9NXF1 929 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms