RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 POLR2EP19388 210 aaKnown RBP11.23□□□□□ -0.61
FOXP4-201ENST00000307972 TNNI3P19429 210 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 CD22P20273 847 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 CSTF2P33240 577 aaKnown RBP eCLIP11.23□□□□□ -0.61
FOXP4-201ENST00000307972 ETV6P41212 452 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 PLXNA3P51805 1871 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 SNRPD1P62314 119 aaKnown RBP11.23□□□□□ -0.61
FOXP4-201ENST00000307972 B4GALNT1Q00973 533 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 HNRNPA0Q13151 305 aaKnown RBP11.23□□□□□ -0.61
FOXP4-201ENST00000307972 USP30Q70CQ3 517 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 SZRD1Q7Z422 152 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 NOXA1Q86UR1 476 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 HUS1BQ8NHY5 278 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 FRMD6Q96NE9 622 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 OPALINQ96PE5 141 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 TMEM121BQ9BXQ6 578 aaPredicted RBP11.23□□□□□ -0.61
FOXP4-201ENST00000307972 MIEF1Q9NQG6 463 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 TOR4AQ9NXH8 423 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 PRAMEF33A0A0G2JMD5 474 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 PRAMEF10O60809 474 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 CATP04040 527 aaKnown RBP11.23□□□□□ -0.61
FOXP4-201ENST00000307972 CYP17A1P05093 508 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 CYP4F8P98187 520 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 MC1RQ01726 317 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 FAM214AQ32MH5 1076 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 SPIN4Q56A73 249 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 SYCE2Q6PIF2 218 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 KLHL17Q6TDP4 642 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 TSEN54Q7Z6J9 526 aaKnown RBP11.23□□□□□ -0.61
FOXP4-201ENST00000307972 OXR1Q8N573 874 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 OR7G1Q8NGA0 311 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 OR2AP1Q8NGE2 309 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 LINC01599Q8WXQ3 324 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 CIDECQ96AQ7 238 aaPredicted RBP11.23□□□□□ -0.61
FOXP4-201ENST00000307972 C1GALT1C1Q96EU7 318 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 MCCC1Q96RQ3 725 aaPredicted RBP11.23□□□□□ -0.61
FOXP4-201ENST00000307972 SGIP1Q9BQI5 828 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 ACER3Q9NUN7 267 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 MBD1Q9UIS9 605 aaPredicted RBP11.23□□□□□ -0.61
FOXP4-201ENST00000307972 KCNE2Q9Y6J6 123 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 ENPP4Q9Y6X5 453 aa11.23□□□□□ -0.61
FOXP4-201ENST00000307972 C1orf226A1L170 272 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 PRRG1O14668 218 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 SEPT4O43236 478 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 SCG5P05408 212 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 MPC1LP0DKB6 136 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 GABRB1P18505 474 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 SSTR4P31391 388 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 TIA1P31483 386 aaKnown RBP eCLIP11.22□□□□□ -0.61
FOXP4-201ENST00000307972 ALDH9A1P49189 494 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 SP140Q13342 867 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 IRF3Q14653 427 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 MFSD4BQ5TF39 518 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 TRIQKQ629K1 86 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 DEF8Q6ZN54 512 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 C11orf74Q86VG3 221 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 ATCAYQ86WG3 371 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 TCEANCQ8N8B7 351 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 ARL14EPQ8N8R7 260 aaPredicted RBP11.22□□□□□ -0.61
FOXP4-201ENST00000307972 OR7G3Q8NG95 312 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 OR52N2Q8NGI0 321 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 ASB15Q8WXK1 588 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 FOPNLQ96NB1 174 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 MND1Q9BWT6 205 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 DKK3Q9UBP4 350 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 LSM7Q9UK45 103 aaKnown RBP11.22□□□□□ -0.61
FOXP4-201ENST00000307972 STUB1Q9UNE7 303 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 SCN10AQ9Y5Y9 1956 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 EIF3FO00303 357 aaPredicted RBP11.22□□□□□ -0.61
FOXP4-201ENST00000307972 GCM2O75603 506 aaPredicted RBP11.22□□□□□ -0.61
FOXP4-201ENST00000307972 TGFB1P01137 390 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 STK19P49842 368 aaPredicted RBP11.22□□□□□ -0.61
FOXP4-201ENST00000307972 ATN1P54259 1190 aaPredicted RBP11.22□□□□□ -0.61
FOXP4-201ENST00000307972 UBE3AQ05086 875 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 RBBP4Q09028 425 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 NCF4Q15080 339 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 CLPPQ16740 277 aaPredicted RBP11.22□□□□□ -0.61
FOXP4-201ENST00000307972 PLEKHS1Q5SXH7 462 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 TYW3Q6IPR3 259 aaKnown RBP11.22□□□□□ -0.61
FOXP4-201ENST00000307972 ZNF438Q7Z4V0 828 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 TMEM173Q86WV6 379 aaPredicted RBP11.22□□□□□ -0.61
FOXP4-201ENST00000307972 SIMC1Q8NDZ2 872 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 OR4C15Q8NGM1 316 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 CHAC2Q8WUX2 184 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 RASSF5Q8WWW0 418 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 FOXJ1Q92949 421 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 UCK2Q9BZX2 261 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 REEP4Q9H6H4 257 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 HHATLQ9HCP6 504 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 TRPV5Q9NQA5 729 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 MARCH5Q9NX47 278 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 TVP23BQ9NYZ1 205 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 MALT1Q9UDY8 824 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 GABRQQ9UN88 632 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 TRAPPC4Q9Y296 219 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 RPL36Q9Y3U8 105 aaKnown RBP11.22□□□□□ -0.61
FOXP4-201ENST00000307972 CCDC88CQ9P219 2028 aa11.22□□□□□ -0.61
FOXP4-201ENST00000307972 A0A1W2PQL4 384 aaPredicted RBP11.22□□□□□ -0.61
FOXP4-201ENST00000307972 RNASET2O00584 256 aaKnown RBP11.22□□□□□ -0.61
FOXP4-201ENST00000307972 INPPL1O15357 1258 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms