RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 IRF6O14896 467 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 FGF19O95750 216 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 PRKACBP22694 351 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 GAS6Q14393 721 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 SPIN4Q56A73 249 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 CCDC74AQ96AQ1 378 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 DHX33Q9H6R0 707 aaKnown RBP12.96□□□□□ -0.33
TRIM56-201ENST00000306085 CD9P21926 228 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 RPL13AP40429 203 aaKnown RBP12.96□□□□□ -0.33
TRIM56-201ENST00000306085 RUNX2Q13950 521 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 SGCAQ16586 387 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 CERS6Q6ZMG9 384 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 PTERQ96BW5 349 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 ZNF419Q96HQ0 510 aaPredicted RBP12.96□□□□□ -0.33
TRIM56-201ENST00000306085 EBF2Q9HAK2 575 aa12.96□□□□□ -0.33
TRIM56-201ENST00000306085 CLIC1O00299 241 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 TREHO43280 583 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 ZIC2O95409 532 aaPredicted RBP12.96□□□□□ -0.34
TRIM56-201ENST00000306085 CRYZL1O95825 349 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 AK4P27144 223 aaPredicted RBP12.96□□□□□ -0.34
TRIM56-201ENST00000306085 FTHL17Q9BXU8 183 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 ALOX15BO15296 676 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 CHRNB2P17787 502 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 TSFMP43897 325 aaKnown RBP12.96□□□□□ -0.34
TRIM56-201ENST00000306085 DCLRE1AQ6PJP8 1040 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 MON1AQ86VX9 555 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 AVL9Q8NBF6 648 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 SECISBP2Q96T21 854 aaKnown RBP12.96□□□□□ -0.34
TRIM56-201ENST00000306085 TCAF1Q9Y4C2 921 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 CDC42BPAQ5VT25 1732 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 DPP6P42658 865 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 EEFSECP57772 596 aaKnown RBP12.96□□□□□ -0.34
TRIM56-201ENST00000306085 TMEM164Q5U3C3 297 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 UGT2A3Q6UWM9 527 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 NUDT13Q86X67 352 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 METTL4Q8N3J2 472 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 FAM46DQ8NEK8 389 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 COG8Q96MW5 612 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 CADM1Q9BY67 442 aaKnown RBP12.96□□□□□ -0.34
TRIM56-201ENST00000306085 NLGN3Q9NZ94 848 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 CLEC4EQ9ULY5 219 aa12.96□□□□□ -0.34
TRIM56-201ENST00000306085 ERI3O43414 337 aaKnown RBP12.95□□□□□ -0.34
TRIM56-201ENST00000306085 FMO6PO60774 539 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 DIRAS1O95057 198 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 TEX44Q53QW1 395 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 CELF3Q5SZQ8 465 aaKnown RBP12.95□□□□□ -0.34
TRIM56-201ENST00000306085 SERPINF1P36955 418 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 PTH2RP49190 550 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 SEMG2Q02383 582 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 SLBPQ14493 270 aaKnown RBP eCLIP12.95□□□□□ -0.34
TRIM56-201ENST00000306085 SLC10A1Q14973 349 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 OR56A1Q8NGH5 318 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 OR5H2Q8NGV7 314 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 DCUN1D4Q92564 292 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 TTPALQ9BTX7 342 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 BTBD1Q9H0C5 482 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 TPSB2P20231 275 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 ERVK-16P61578 105 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 PPP1R8Q12972 351 aaKnown RBP12.95□□□□□ -0.34
TRIM56-201ENST00000306085 TPSAB1Q15661 275 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 HSH2DQ96JZ2 352 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 PCDHGA5Q9Y5G8 931 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 CNTNAP1P78357 1384 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 NUPL2O15504 423 aaKnown RBP12.95□□□□□ -0.34
TRIM56-201ENST00000306085 B4GALT2O60909 372 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 ERVK-8P63133 956 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 CRHR2Q13324 411 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 DPY19L1Q2PZI1 675 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 ISOC1Q96CN7 298 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 TCEAL7Q9BRU2 100 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 C17orf113A0A1B0GUU1 675 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 MAS1P04201 325 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 ASPAP45381 313 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 PRAMEF13Q5VWM6 474 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 KCNIP4Q6PIL6 250 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 ZNF286AQ9HBT8 521 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 AIF1P55008 147 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 HERVK_113P63132 956 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 LRRC32Q14392 662 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 HIST2H3PS2Q5TEC6 136 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 ARHGAP40Q5TG30 622 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 SPRYD4Q8WW59 207 aaPredicted RBP12.95□□□□□ -0.34
TRIM56-201ENST00000306085 LRRC46Q96FV0 321 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 ACTR6Q9GZN1 396 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 ATXN7L1Q9ULK2 861 aaPredicted RBP12.95□□□□□ -0.34
TRIM56-201ENST00000306085 CPED1A4D0V7 1026 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 PEX12O00623 359 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 PRMT2P55345 433 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 SP3Q02447 781 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 MCATQ8IVS2 390 aaKnown RBP12.95□□□□□ -0.34
TRIM56-201ENST00000306085 FTMTQ8N4E7 242 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 HMCESQ96FZ2 354 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 ZNF821O75541 412 aaPredicted RBP12.95□□□□□ -0.34
TRIM56-201ENST00000306085 H2BFMP0C1H6 154 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 GNSP15586 552 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 IRF9Q00978 393 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 MALLQ13021 153 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 CEACAM19Q7Z692 300 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 CNTN3Q9P232 1028 aa12.95□□□□□ -0.34
TRIM56-201ENST00000306085 E7ESA3 106 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms